X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fdatamodel%2FMappingTest.java;h=0bf753d999126b5b048f39d616246954a2e0443b;hb=ca160187a050f6d4e50158cd5b51f75c83a7179e;hp=03274668d104b6e722b5ea199b11d05f59b9a0e3;hpb=db93a1adcbe0a4eaaf06e0a70ade0d6c5c1961c3;p=jalview.git diff --git a/test/jalview/datamodel/MappingTest.java b/test/jalview/datamodel/MappingTest.java index 0327466..0bf753d 100644 --- a/test/jalview/datamodel/MappingTest.java +++ b/test/jalview/datamodel/MappingTest.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2) - * Copyright (C) 2015 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * @@ -23,10 +23,12 @@ package jalview.datamodel; import static org.testng.AssertJUnit.assertEquals; import static org.testng.AssertJUnit.assertSame; +import jalview.gui.JvOptionPane; import jalview.util.MapList; import java.util.Arrays; +import org.testng.annotations.BeforeClass; import org.testng.annotations.Test; /** @@ -34,6 +36,14 @@ import org.testng.annotations.Test; */ public class MappingTest { + + @BeforeClass(alwaysRun = true) + public void setUpJvOptionPane() + { + JvOptionPane.setInteractiveMode(false); + JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION); + } + /** * trite test of the intersectVisContigs method for a simple DNA -> Protein * exon map and a range of visContigs @@ -41,11 +51,13 @@ public class MappingTest @Test(groups = { "Functional" }) public void testIntersectVisContigs() { - MapList fk = new MapList(new int[] { 1, 6, 8, 13, 15, 23 }, new int[] { - 1, 7 }, 3, 1); + MapList fk = new MapList(new int[] { 1, 6, 8, 13, 15, 23 }, + new int[] + { 1, 7 }, 3, 1); Mapping m = new Mapping(fk); - Mapping m_1 = m.intersectVisContigs(new int[] { fk.getFromLowest(), - fk.getFromHighest() }); + Mapping m_1 = m + .intersectVisContigs(new int[] + { fk.getFromLowest(), fk.getFromHighest() }); Mapping m_2 = m.intersectVisContigs(new int[] { 1, 7, 11, 20 }); // assertions from output values 'as is', not checked for correctness