X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fdatamodel%2FSeqCigarTest.java;h=3b50ce129dea6bdcb1e9aab9b883f9d5db5f8514;hb=cce9e4df53a94d9e7f841d25a6063c597f7a2ab9;hp=fc0cb0e10962d6cf4466e30384db419d724ad61a;hpb=960206d9ae05d85b42552025c3dec4b5f7b14c15;p=jalview.git diff --git a/test/jalview/datamodel/SeqCigarTest.java b/test/jalview/datamodel/SeqCigarTest.java index fc0cb0e..3b50ce1 100644 --- a/test/jalview/datamodel/SeqCigarTest.java +++ b/test/jalview/datamodel/SeqCigarTest.java @@ -1,9 +1,9 @@ package jalview.datamodel; -import static org.junit.Assert.assertEquals; -import static org.junit.Assert.assertFalse; +import static org.testng.AssertJUnit.assertEquals; +import static org.testng.AssertJUnit.assertFalse; -import org.junit.Test; +import org.testng.annotations.Test; /** * Unit tests for SeqCigar @@ -15,7 +15,7 @@ public class SeqCigarTest * * TODO: split into separate tests */ - @Test + @Test(groups ={ "Functional" }) public void testSomething() throws Exception { String o_seq = "asdfktryasdtqwrtsaslldddptyipqqwaslchvhttt"; @@ -125,6 +125,8 @@ public class SeqCigarTest * String * @return String */ + + protected void testCigar_string(Sequence seq, String ex_cs_gapped) { SeqCigar c_sgapped = new SeqCigar(seq); @@ -133,6 +135,7 @@ public class SeqCigarTest cs_gapped); } + protected void testSeqRecovery(SeqCigar gen_sgapped, SequenceI s_gapped) {