X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fdatamodel%2FSeqCigarTest.java;h=b8748b64c4631ed7b0128f1e7a24efb35523c307;hb=3412b273e964fb1a9d22564b04a5f0c827ec2461;hp=fc0cb0e10962d6cf4466e30384db419d724ad61a;hpb=4bba61a3c701f83bdcb6707c4d9f17a1f5faaa04;p=jalview.git diff --git a/test/jalview/datamodel/SeqCigarTest.java b/test/jalview/datamodel/SeqCigarTest.java index fc0cb0e..b8748b6 100644 --- a/test/jalview/datamodel/SeqCigarTest.java +++ b/test/jalview/datamodel/SeqCigarTest.java @@ -1,9 +1,9 @@ package jalview.datamodel; -import static org.junit.Assert.assertEquals; -import static org.junit.Assert.assertFalse; +import static org.testng.AssertJUnit.assertEquals; +import static org.testng.AssertJUnit.assertFalse; -import org.junit.Test; +import org.testng.annotations.Test; /** * Unit tests for SeqCigar @@ -125,6 +125,8 @@ public class SeqCigarTest * String * @return String */ + + protected void testCigar_string(Sequence seq, String ex_cs_gapped) { SeqCigar c_sgapped = new SeqCigar(seq); @@ -133,6 +135,7 @@ public class SeqCigarTest cs_gapped); } + protected void testSeqRecovery(SeqCigar gen_sgapped, SequenceI s_gapped) {