X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fext%2Fparadise%2FTestAnnotate3D.java;h=126c22196b02d24014450b1fb71ab89669bfa581;hb=29134e3225e8fd45d5c2c3067e79779577997f51;hp=3365c52ffcf80ec33406dfde87dbdfe54cf670fe;hpb=be32c14cd8e48fe0a207cd7030cb9cd46f894678;p=jalview.git

diff --git a/test/jalview/ext/paradise/TestAnnotate3D.java b/test/jalview/ext/paradise/TestAnnotate3D.java
index 3365c52..126c221 100644
--- a/test/jalview/ext/paradise/TestAnnotate3D.java
+++ b/test/jalview/ext/paradise/TestAnnotate3D.java
@@ -20,28 +20,31 @@
  */
 package jalview.ext.paradise;
 
-import static org.junit.Assert.assertTrue;
+import static org.testng.AssertJUnit.assertTrue;
+
+import jalview.datamodel.AlignmentI;
+import jalview.datamodel.SequenceI;
+import jalview.io.FastaFile;
+import jalview.io.FormatAdapter;
 
 import java.io.BufferedReader;
 import java.io.File;
 import java.io.Reader;
 import java.util.Iterator;
 
-import org.junit.Assert;
-import org.junit.Test;
+import org.testng.Assert;
+import org.testng.AssertJUnit;
+import org.testng.annotations.Test;
 
 import MCview.PDBfile;
-import compbio.util.FileUtil;
 
-import jalview.datamodel.AlignmentI;
-import jalview.datamodel.SequenceI;
-import jalview.io.FastaFile;
-import jalview.io.FormatAdapter;
+import compbio.util.FileUtil;
 
 public class TestAnnotate3D
 {
 
-  @Test
+  @Test(groups =
+  { "Functional" }, enabled = false)
   public void test1GIDbyId() throws Exception
   {
     // use same ID as standard tests given at
@@ -51,7 +54,8 @@ public class TestAnnotate3D
     testRNAMLcontent(ids, null);
   }
 
-  @Test
+  @Test(groups =
+  { "Functional" }, enabled = false)
   public void testIdVsContent2GIS() throws Exception
   {
     Iterator<Reader> ids = Annotate3D.getRNAMLForPDBId("2GIS");
@@ -95,7 +99,8 @@ public class TestAnnotate3D
    * 
    * @throws Exception
    */
-  @Test
+  @Test(groups =
+  { "Functional" }, enabled = false)
   public void testPDBfileVsRNAML() throws Exception
   {
     PDBfile pdbf = new PDBfile(true, false, true, "examples/2GIS.pdb",
@@ -109,6 +114,8 @@ public class TestAnnotate3D
     testRNAMLcontent(readers, pdbf);
   }
 
+  @Test(groups =
+  { "Functional" }, enabled = false)
   private void testRNAMLcontent(Iterator<Reader> readers, PDBfile pdbf)
           throws Exception
   {
@@ -152,7 +159,7 @@ public class TestAnnotate3D
             }
             if (struseq == null)
             {
-              Assert.fail("Couldn't find this sequence in original input:\n"
+              AssertJUnit.fail("Couldn't find this sequence in original input:\n"
                       + new FastaFile().print(new SequenceI[]
                       { sq })
                       + "\n\nOriginal input:\n"