X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fext%2Frbvi%2Fchimera%2FJalviewChimeraView.java;h=d7da606192ecd180b4b555d52866dec3cc653cca;hb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;hp=34e07f2fa56eef85be2da4e8970bd2dbe6c1249f;hpb=5598fe7c3f5a9ac2d1b8b73a2608ebb4097ae94d;p=jalview.git diff --git a/test/jalview/ext/rbvi/chimera/JalviewChimeraView.java b/test/jalview/ext/rbvi/chimera/JalviewChimeraView.java index 34e07f2..d7da606 100644 --- a/test/jalview/ext/rbvi/chimera/JalviewChimeraView.java +++ b/test/jalview/ext/rbvi/chimera/JalviewChimeraView.java @@ -1,3 +1,23 @@ +/* + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9) + * Copyright (C) 2015 The Jalview Authors + * + * This file is part of Jalview. + * + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. + */ package jalview.ext.rbvi.chimera; import static org.testng.AssertJUnit.assertEquals; @@ -26,8 +46,7 @@ public class JalviewChimeraView @BeforeClass(alwaysRun = true) public static void setUpBeforeClass() throws Exception { - jalview.bin.Jalview.main(new String[] - { + jalview.bin.Jalview.main(new String[] { "-noquestionnaire -nonews -props", "test/jalview/ext/rbvi/chimera/testProps.jvprops" }); } @@ -41,7 +60,7 @@ public class JalviewChimeraView jalview.gui.Desktop.instance.closeAll_actionPerformed(null); } - @Test(groups ={ "Functional" }) + @Test(groups = { "Functional" }) public void testSingleSeqViewChimera() { Cache.setProperty(Preferences.STRUCTURE_DISPLAY, @@ -58,7 +77,8 @@ public class JalviewChimeraView { dsq = dsq.getDatasetSequence(); } - if (dsq.getAllPDBEntries() != null && dsq.getAllPDBEntries().size() > 0) + if (dsq.getAllPDBEntries() != null + && dsq.getAllPDBEntries().size() > 0) { for (int q = 0; q < dsq.getAllPDBEntries().size(); q++) { @@ -67,8 +87,8 @@ public class JalviewChimeraView structureViewer.setViewerType(ViewerType.CHIMERA); JalviewStructureDisplayI chimeraViewer = structureViewer .viewStructures(dsq.getAllPDBEntries().elementAt(q), - new SequenceI[] - { sq }, af.getCurrentView().getAlignPanel()); + new SequenceI[] { sq }, af.getCurrentView() + .getAlignPanel()); /* * Wait for viewer load thread to complete */