X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fgui%2FStructureChooserTest.java;h=71d062c242f4d58d62fbcb5947c6bbbb997e1052;hb=8bbcfb93404decd6d660ca32b69a29f8a1f34e82;hp=24e8bc97d2c8b91bc9c5d34ea904376a8559c221;hpb=fd235cc7542d6e308e054a8a76580a6c511ae631;p=jalview.git

diff --git a/test/jalview/gui/StructureChooserTest.java b/test/jalview/gui/StructureChooserTest.java
index 24e8bc9..71d062c 100644
--- a/test/jalview/gui/StructureChooserTest.java
+++ b/test/jalview/gui/StructureChooserTest.java
@@ -1,7 +1,8 @@
 package jalview.gui;
 
-import static org.junit.Assert.assertEquals;
-import static org.junit.Assert.assertTrue;
+import static org.testng.AssertJUnit.assertEquals;
+import static org.testng.AssertJUnit.assertTrue;
+
 import jalview.datamodel.DBRefEntry;
 import jalview.datamodel.PDBEntry;
 import jalview.datamodel.Sequence;
@@ -9,18 +10,19 @@ import jalview.datamodel.SequenceI;
 
 import java.util.Vector;
 
-import org.junit.After;
-import org.junit.Before;
-import org.junit.Test;
+import org.testng.annotations.AfterMethod;
+import org.testng.annotations.BeforeMethod;
+import org.testng.annotations.Test;
 
 public class StructureChooserTest
 {
   Sequence seq;
 
-  @Before
+ @BeforeMethod(alwaysRun = true)
   public void setUp() throws Exception
   {
-    seq = new Sequence("Test_Seq", "ABCDEFGHIJKLMNOPQRSTUVWXYZ", 1, 26);
+    seq = new Sequence("PDB|4kqy|4KQY|A", "ABCDEFGHIJKLMNOPQRSTUVWXYZ", 1,
+            26);
     seq.setDatasetSequence(seq);
     for (int x = 1; x < 5; x++)
     {
@@ -38,7 +40,7 @@ public class StructureChooserTest
     seq.setPDBId(pdbIds);
   }
 
-  @After
+  @AfterMethod
   public void tearDown() throws Exception
   {
     seq = null;
@@ -46,15 +48,17 @@ public class StructureChooserTest
 
 
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void buildQueryTest()
   {
+    String query = StructureChooser.buildQuery(seq);
+    System.out.println(">>>>>>>>>> query : " + query);
     assertEquals(
-            "1tim OR text:XYZ_1 OR text:XYZ_2 OR text:XYZ_3 OR text:XYZ_4",
-            StructureChooser.buildQuery(seq));
+            "4kqy OR text:1tim OR text:XYZ_1 OR text:XYZ_2 OR text:XYZ_3 OR text:XYZ_4",
+            query);
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void populateFilterComboBoxTest()
   {
     SequenceI[] selectedSeqs = new SequenceI[]
@@ -63,17 +67,17 @@ public class StructureChooserTest
             null);
     sc.populateFilterComboBox();
     int optionsSize = sc.getCmbFilterOption().getItemCount();
-    assertEquals(2, optionsSize); // if structures are not discovered then don't
+    assertEquals(3, optionsSize); // if structures are not discovered then don't
                                   // populate filter options
 
     sc.setStructuresDiscovered(true);
     sc.populateFilterComboBox();
     optionsSize = sc.getCmbFilterOption().getItemCount();
-    assertTrue(optionsSize > 2); // if structures are found, filter options
+    assertTrue(optionsSize > 3); // if structures are found, filter options
                                  // should be populated
   }
 
-  @Test
+  @Test(groups ={ "Functional" })
   public void fetchStructuresInfoTest()
   {
     SequenceI[] selectedSeqs = new SequenceI[]