X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fgui%2Fstructurechooser%2FStructureChooserQuerySourceTest.java;fp=test%2Fjalview%2Fgui%2Fstructurechooser%2FStructureChooserQuerySourceTest.java;h=28dd594f571b50b0dcf088552b3e4c241ec11d35;hb=eb3e681d6e82ccdd5d312d1981dfb306e7f479f0;hp=4579b9c5e832f6526977bc89e34a1ba3ece5d411;hpb=cb31e23d9138e481479623374aed7767bf8934d2;p=jalview.git

diff --git a/test/jalview/gui/structurechooser/StructureChooserQuerySourceTest.java b/test/jalview/gui/structurechooser/StructureChooserQuerySourceTest.java
index 4579b9c..28dd594 100644
--- a/test/jalview/gui/structurechooser/StructureChooserQuerySourceTest.java
+++ b/test/jalview/gui/structurechooser/StructureChooserQuerySourceTest.java
@@ -246,23 +246,25 @@ public class StructureChooserQuerySourceTest
     upSeq_fer1_maize
             .addDBRef(new DBRefEntry("UNIPROT", "0", "P27787", null, true));
     upSeq_fer1_maize.createDatasetSequence();
-    
-    upSeq_epas1_human = new Sequence("EPAS1_HUMAN","MTADKEKKRSSSERRKEKSRDAARCRRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLRTHKLLSS\n"
-            + "VCSENESEAEADQQMDNLYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSIFDFTHPCDHEEIR\n"
-            + "ENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRTVNLKSATWKVLHCTGQVKVYNNCPPHNSLCGYKE\n"
-            + "PLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSEN\n"
-            + "MTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVVFSMDQTE\n"
-            + "SLFKPHLMAMNSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDAIISLDFGNQNFEESSAYGKAIL\n"
-            + "PPSQPWATELRSHSTQSEAGSLPAFTVPQAAAPGSTTPSATSSSSSCSTPNSPEDYYTSLDNDLKIEVIEKL\n"
-            + "FAMDTEAKDQCSTQTDFNELDLETLAPYIPMDGEDFQLSPICPEERLLAENPQSTPQHCFSAMTNIFQPLAP\n"
-            + "VAPHSPFLLDKFQQQLESKKTEPEHRPMSSIFFDAGSKASLPPCCGQASTPLSSMGGRSNTQWPPDPPLHFG\n"
-            + "PTKWAVGDQRTEFLGAAPLGPPVSPPHVSTFKTRSAKGFGARGPDVLSPAMVALSNKLKLKRQLEYEEQAFQ\n"
-            + "DLSGGDPPGGSTSHLMWKRMKNLRGGSCPLMPDKPLSANVPNDKFTQNPMRGLGHPLRHLPLPQPPSAISPG\n"
-            + "ENSKSRFPPQCYATQYQDYSLSSAHKVSGMASRLLGPSFESYLLPELTRYDCEVNVPVLGSSTLLQGGDLLR\n"
-            + "ALDQAT");
-    upSeq_epas1_human.setDescription("Endothelial PAS domain-containing protein 1");
+
+    upSeq_epas1_human = new Sequence("EPAS1_HUMAN",
+            "MTADKEKKRSSSERRKEKSRDAARCRRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLRTHKLLSS\n"
+                    + "VCSENESEAEADQQMDNLYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSIFDFTHPCDHEEIR\n"
+                    + "ENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRTVNLKSATWKVLHCTGQVKVYNNCPPHNSLCGYKE\n"
+                    + "PLLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSEN\n"
+                    + "MTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVVFSMDQTE\n"
+                    + "SLFKPHLMAMNSIFDSSGKGAVSEKSNFLFTKLKEEPEELAQLAPTPGDAIISLDFGNQNFEESSAYGKAIL\n"
+                    + "PPSQPWATELRSHSTQSEAGSLPAFTVPQAAAPGSTTPSATSSSSSCSTPNSPEDYYTSLDNDLKIEVIEKL\n"
+                    + "FAMDTEAKDQCSTQTDFNELDLETLAPYIPMDGEDFQLSPICPEERLLAENPQSTPQHCFSAMTNIFQPLAP\n"
+                    + "VAPHSPFLLDKFQQQLESKKTEPEHRPMSSIFFDAGSKASLPPCCGQASTPLSSMGGRSNTQWPPDPPLHFG\n"
+                    + "PTKWAVGDQRTEFLGAAPLGPPVSPPHVSTFKTRSAKGFGARGPDVLSPAMVALSNKLKLKRQLEYEEQAFQ\n"
+                    + "DLSGGDPPGGSTSHLMWKRMKNLRGGSCPLMPDKPLSANVPNDKFTQNPMRGLGHPLRHLPLPQPPSAISPG\n"
+                    + "ENSKSRFPPQCYATQYQDYSLSSAHKVSGMASRLLGPSFESYLLPELTRYDCEVNVPVLGSSTLLQGGDLLR\n"
+                    + "ALDQAT");
+    upSeq_epas1_human
+            .setDescription("Endothelial PAS domain-containing protein 1");
     upSeq_epas1_human
-    .addDBRef(new DBRefEntry("UNIPROT", "0", "Q99814", null, true));
+            .addDBRef(new DBRefEntry("UNIPROT", "0", "Q99814", null, true));
     upSeq_epas1_human.createDatasetSequence();
   }
 
@@ -273,7 +275,7 @@ public class StructureChooserQuerySourceTest
     upSeq = null;
     upSeq_r1ab = null;
     upSeq_fer1_maize = null;
-    upSeq_epas1_human=null;
+    upSeq_epas1_human = null;
   }
 
   @SuppressWarnings("deprecation")
@@ -465,7 +467,7 @@ public class StructureChooserQuerySourceTest
               pdbResponse);
       assertEquals(upResponse.getNumberOfItemsFound(),
               joinedResp.getNumberOfItemsFound());
-      
+
       // Special data test case
       if (testUpSeq.getDisplayId(true)
               .equals(upSeq_epas1_human.getDisplayId(true)))
@@ -510,7 +512,8 @@ public class StructureChooserQuerySourceTest
   {
     setUp();
     return new Object[][] { { upSeq }, { upSeq_insulin }, { upSeq_r1ab },
-        { upSeq_fer1_maize },{upSeq_epas1_human} };
+        { upSeq_fer1_maize },
+        { upSeq_epas1_human } };
   }
 
   @Test(groups = { "Functional" })
@@ -533,5 +536,5 @@ public class StructureChooserQuerySourceTest
     name = "abcde12[345a]fg";
     AssertJUnit.assertEquals("abcde12345afg",
             PDBStructureChooserQuerySource.sanitizeSeqName(name));
-  }  
+  }
 }