X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fio%2FAnnotatedPDBFileInputTest.java;h=ef88ca5700abfbfefd055a9b9795e68458a3e457;hb=b5893211716553a96176a37f7c6e293cd6618559;hp=6a61d2ce85194cddc1640a59af1e21b3149c936e;hpb=ac207fd787051c6e0f4f9f10ea6b94452480d931;p=jalview.git

diff --git a/test/jalview/io/AnnotatedPDBFileInputTest.java b/test/jalview/io/AnnotatedPDBFileInputTest.java
index 6a61d2c..ef88ca5 100644
--- a/test/jalview/io/AnnotatedPDBFileInputTest.java
+++ b/test/jalview/io/AnnotatedPDBFileInputTest.java
@@ -12,6 +12,7 @@ import org.junit.Before;
 import org.junit.BeforeClass;
 import org.junit.Test;
 
+import jalview.bin.Cache;
 import jalview.datamodel.AlignmentAnnotation;
 import jalview.datamodel.AlignmentI;
 import jalview.datamodel.PDBEntry;
@@ -34,6 +35,10 @@ public class AnnotatedPDBFileInputTest
   @Before
   public void setup() throws Exception
   {
+    Cache.applicationProperties.setProperty("STRUCT_FROM_PDB",
+            Boolean.TRUE.toString());
+    Cache.applicationProperties.setProperty("ADD_SS_ANN",
+            Boolean.TRUE.toString());
     FileLoader loader = new FileLoader(false);
     AlignFrame af = loader.LoadFileWaitTillLoaded(pdbStr,
             FormatAdapter.FILE);