X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fio%2FAnnotationFileIOTest.java;h=c3aa13e8fd4d97d7aba67c4b69e30e875e50c151;hb=22a631d0234218b52b7adeeb28deee5e12026075;hp=5b90e1998a86286d86236de3540fdcfc1a9e683e;hpb=483e7163b1fb8d4bcb9393014816c944befce328;p=jalview.git diff --git a/test/jalview/io/AnnotationFileIOTest.java b/test/jalview/io/AnnotationFileIOTest.java index 5b90e19..c3aa13e 100644 --- a/test/jalview/io/AnnotationFileIOTest.java +++ b/test/jalview/io/AnnotationFileIOTest.java @@ -70,7 +70,7 @@ public class AnnotationFileIOTest } } - public static AlignmentI readAlignmentFile(File f) + AlignmentI readAlignmentFile(File f) { System.out.println("Reading file: " + f); String ff = f.getPath(); @@ -106,9 +106,7 @@ public class AnnotationFileIOTest * - label for IO class used to write and read back in the data from * f */ - - // @Test(groups ={ "Functional" }) - public static void testAnnotationFileIO(String testname, File f, + void testAnnotationFileIO(String testname, File f, File annotFile) { System.out.println("Test: " + testname + "\nReading annotation file '" @@ -126,6 +124,7 @@ public class AnnotationFileIOTest DataSourceType.FILE)); AnnotationFile aff = new AnnotationFile(); + // ViewDef is not used by Jalview ViewDef v = aff.new ViewDef(null, al.getHiddenSequences(), cs, new Hashtable()); String anfileout = new AnnotationFile().printAnnotations(