X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fio%2FIdentifyFileTest.java;h=22284a4091562f55fa205da233fc210d522a23c9;hb=c19d2a91ca05e052e3408bf5852d88eb5d0608f1;hp=1c34e1f7e802fe61cd70f47ef52b192002865490;hpb=4de381907ba9fbd6b079aaf5f1d089680f0d9c6f;p=jalview.git diff --git a/test/jalview/io/IdentifyFileTest.java b/test/jalview/io/IdentifyFileTest.java index 1c34e1f..22284a4 100644 --- a/test/jalview/io/IdentifyFileTest.java +++ b/test/jalview/io/IdentifyFileTest.java @@ -1,13 +1,33 @@ +/* + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2) + * Copyright (C) 2015 The Jalview Authors + * + * This file is part of Jalview. + * + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. + */ package jalview.io; import org.testng.Assert; import org.testng.annotations.DataProvider; import org.testng.annotations.Test; -public class IdentifyFileTest { +public class IdentifyFileTest +{ - @Test(groups = - { "Functional" }, dataProvider = "identifyFiles") + @Test(groups = { "Functional" }, dataProvider = "identifyFiles") public void Identify(String data, String expectedFileType) { String protocol = AppletFormatAdapter.FILE; @@ -20,23 +40,26 @@ public class IdentifyFileTest { @DataProvider(name = "identifyFiles") public Object[][] IdentifyFileDP() { - return new Object[][] - { - { "examples/example.json", "JSON" }, - { "examples/plantfdx.fa", "FASTA" }, - { "examples/dna_interleaved.phy", "PHYLIP" }, - { "examples/2GIS.pdb", "PDB" }, - { "examples/rf00031_folded.stk", "STH" }, - { "examples/testdata/test.rnaml", "RNAML" }, - { "examples/testdata/test.aln", "CLUSTAL" }, - { "examples/testdata/test.pfam", "PFAM" }, - { "examples/testdata/test.msf", "MSF" }, - { "examples/testdata/test.pir", "PIR" }, - { "examples/testdata/test.html", "HTML" }, - { "examples/testdata/test.pileup", "PileUp" }, - { "examples/testdata/test.blc", "BLC" }, - { "examples/testdata/simplegff3.gff", "GFF v2 or v3" }, - { "examples/testdata/test.jvp", "Jalview" }, + return new Object[][] { + { "examples/example.json", "JSON" }, + { "examples/plantfdx.fa", "FASTA" }, + { "examples/dna_interleaved.phy", "PHYLIP" }, + { "examples/2GIS.pdb", "PDB" }, + { "examples/rf00031_folded.stk", "STH" }, + { "examples/testdata/test.rnaml", "RNAML" }, + { "examples/testdata/test.aln", "CLUSTAL" }, + { "examples/testdata/test.pfam", "PFAM" }, + { "examples/testdata/test.msf", "MSF" }, + { "examples/testdata/test.pir", "PIR" }, + { "examples/testdata/test.html", "HTML" }, + { "examples/testdata/test.pileup", "PileUp" }, + { "examples/testdata/test.blc", "BLC" }, + { "examples/testdata/simplegff3.gff", "GFF v2 or v3" }, + { "examples/testdata/test.jvp", "Jalview" }, + { + "examples/testdata/cullpdb_pc25_res3.0_R0.3_d150729_chains9361.fasta.15316", + "FASTA" }, + // { "examples/testdata/test.amsa", "AMSA" }, // { "examples/test.jnet", "JnetFile" }, };