X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fio%2FJalview2xmlTests.java;h=771250bc4fb5ebc5fe2229e087a0c9c20e1b57b5;hb=b5893211716553a96176a37f7c6e293cd6618559;hp=8b8393437d9bbe1b6bdad01d6a827bda8cecc504;hpb=ac207fd787051c6e0f4f9f10ea6b94452480d931;p=jalview.git

diff --git a/test/jalview/io/Jalview2xmlTests.java b/test/jalview/io/Jalview2xmlTests.java
index 8b83934..771250b 100644
--- a/test/jalview/io/Jalview2xmlTests.java
+++ b/test/jalview/io/Jalview2xmlTests.java
@@ -22,8 +22,17 @@ package jalview.io;
 
 import static org.junit.Assert.assertTrue;
 import static org.junit.Assert.fail;
+
+import java.io.File;
+
+import org.junit.AfterClass;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Test;
+
 import jalview.api.AlignmentViewPanel;
 import jalview.api.ViewStyleI;
+import jalview.bin.Cache;
 import jalview.datamodel.AlignmentAnnotation;
 import jalview.datamodel.SequenceGroup;
 import jalview.datamodel.SequenceI;
@@ -32,13 +41,6 @@ import jalview.gui.Desktop;
 import jalview.schemes.AnnotationColourGradient;
 import jalview.schemes.ColourSchemeI;
 
-import java.io.File;
-
-import org.junit.AfterClass;
-import org.junit.Assert;
-import org.junit.BeforeClass;
-import org.junit.Test;
-
 public class Jalview2xmlTests
 {
 
@@ -254,6 +256,10 @@ public class Jalview2xmlTests
   @Test
   public void viewRefPdbAnnotation() throws Exception
   {
+    Cache.applicationProperties.setProperty("STRUCT_FROM_PDB",
+            Boolean.TRUE.toString());
+    Cache.applicationProperties.setProperty("ADD_SS_ANN",
+            Boolean.TRUE.toString());
     AlignFrame af = new jalview.io.FileLoader().LoadFileWaitTillLoaded(
             "examples/exampleFile_2_7.jar", FormatAdapter.FILE);
     assertTrue("Didn't read in the example file correctly.", af != null);