X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fio%2FPfamFormatInputTest.java;h=c91f8d7933033b31be72b08258a036f4215c7bdf;hb=20d8cc2bb3e2fab2b7f637a3d523c90ceb58903d;hp=17f38b0caee9c0162a52f5b64d5757eb4cb00cb8;hpb=5f4e1e4c330b045e9c8bce28ee132a0fca3834d8;p=jalview.git

diff --git a/test/jalview/io/PfamFormatInputTest.java b/test/jalview/io/PfamFormatInputTest.java
index 17f38b0..c91f8d7 100644
--- a/test/jalview/io/PfamFormatInputTest.java
+++ b/test/jalview/io/PfamFormatInputTest.java
@@ -42,8 +42,9 @@ public class PfamFormatInputTest
   @Test(groups = "Functional")
   public void testPfamFormatNoLimits() throws IOException
   {
-    AlignmentI al = new AppletFormatAdapter().readFile("ASEQ"
-            + '\t' + "...--FFAFAFF--", AppletFormatAdapter.PASTE, "PFAM");
+    AlignmentI al = new AppletFormatAdapter().readFile(
+            "ASEQ" + '\t' + "...--FFAFAFF--", DataSourceType.PASTE,
+            FileFormat.Pfam);
     Assert.assertEquals(1, al.getHeight(), "Wrong number of sequences");
     Assert.assertTrue(al.hasValidSequence(),
             "Didn't extract limits from PFAM ID");
@@ -53,8 +54,8 @@ public class PfamFormatInputTest
   public void testPfamFormatValidLimits() throws IOException
   {
     AlignmentI al = new AppletFormatAdapter().readFile(
-            "ASEQ/15-25" + '\t' + "...--FFAFAFF--",
-            AppletFormatAdapter.PASTE, "PFAM");
+            "ASEQ/15-25" + '\t' + "...--FFAFAFF--", DataSourceType.PASTE,
+            FileFormat.Pfam);
     Assert.assertEquals(1, al.getHeight(), "Wrong number of sequences");
     Assert.assertTrue(al.hasValidSequence(),
             "Didn't extract limits from PFAM ID");