X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fio%2FStockholmFileTest.java;h=4505f169e8c5737944e22847ab612088b3f1f934;hb=c1aad0a5f53087264c63954111b7236cd45b86a1;hp=a0c9336bad4fab4d651b5bef781f77314d5bb48c;hpb=323663120848253cb367f13d7e470790ec451219;p=jalview.git

diff --git a/test/jalview/io/StockholmFileTest.java b/test/jalview/io/StockholmFileTest.java
index a0c9336..4505f16 100644
--- a/test/jalview/io/StockholmFileTest.java
+++ b/test/jalview/io/StockholmFileTest.java
@@ -147,6 +147,11 @@ public class StockholmFileTest
           // compare graphGroup or graph properties - needed to verify JAL-1299
           assertTrue("Graph type not identical.",aa_original[i].graph==aa_new[i].graph);
           assertTrue("Visibility not identical.", aa_original[i].visible==aa_new[i].visible);
+          assertTrue(
+                  "Threshold line not identical.",
+                  aa_original[i].threshold == null ? aa_new[i].threshold == null
+                          : aa_original[i].threshold
+                                  .equals(aa_new[i].threshold));
           // graphGroup may differ, but pattern should be the same
           Integer o_ggrp=new Integer(aa_original[i].graphGroup+2),n_ggrp=new Integer(aa_new[i].graphGroup+2);
           BitSet orig_g=orig_groups.get(o_ggrp),new_g=new_groups.get(n_ggrp);