X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fio%2FTCoffeeScoreFileTest.java;h=6d11ebed96e5bb5db5605a29337769e3ad616b01;hb=60f7107d9fc77f34e96ae4b9780e2d11195aed3b;hp=1ee49366505037aebd6bb0d10986b3d1ec7e62b0;hpb=ffacb1793ba68710f95b293a45eb4b0868b722a2;p=jalview.git

diff --git a/test/jalview/io/TCoffeeScoreFileTest.java b/test/jalview/io/TCoffeeScoreFileTest.java
index 1ee4936..6d11ebe 100644
--- a/test/jalview/io/TCoffeeScoreFileTest.java
+++ b/test/jalview/io/TCoffeeScoreFileTest.java
@@ -42,7 +42,7 @@ public class TCoffeeScoreFileTest {
     final static File ALIGN_FILE = new File("test/jalview/io/tcoffee.fasta_aln");
 	
 	@Test
-	public void testReadHeader() throws IOException, FileNotFoundException, ExceptionFileFormatOrSyntax, ParserConfigurationException, SAXException, ExceptionPermissionDenied, ExceptionLoadingFailed, InterruptedException, ExceptionUnmatchedClosingParentheses {
+	public void testReadHeader() throws IOException {
 
 	    TCoffeeScoreFile scoreFile = new TCoffeeScoreFile(SCORE_FILE.getPath(),AppletFormatAdapter.FILE);
 	    assertTrue(scoreFile.getWarningMessage(),scoreFile.isValid());
@@ -64,7 +64,7 @@ public class TCoffeeScoreFileTest {
 	
 	
 	@Test
-	public void testWrongFile() throws ExceptionFileFormatOrSyntax, ParserConfigurationException, SAXException, ExceptionPermissionDenied, ExceptionLoadingFailed, InterruptedException, ExceptionUnmatchedClosingParentheses {
+	public void testWrongFile()  {
 	    try {
 			TCoffeeScoreFile result = new TCoffeeScoreFile(ALIGN_FILE.getPath(), FormatAdapter.FILE);
 			assertFalse(result.isValid());
@@ -76,7 +76,7 @@ public class TCoffeeScoreFileTest {
 	} 
 
 	@Test
-	public void testHeightAndWidth() throws IOException, ExceptionFileFormatOrSyntax, ParserConfigurationException, SAXException, ExceptionPermissionDenied, ExceptionLoadingFailed, InterruptedException, ExceptionUnmatchedClosingParentheses {
+	public void testHeightAndWidth() throws IOException {
 		TCoffeeScoreFile result = new TCoffeeScoreFile(SCORE_FILE.getPath(), FormatAdapter.FILE);
 		assertTrue(result.isValid());
 		assertEquals( 8, result.getHeight() );
@@ -116,7 +116,7 @@ public class TCoffeeScoreFileTest {
 	}
 
 	@Test
-	public void testParse() throws IOException, ExceptionFileFormatOrSyntax, ParserConfigurationException, SAXException, ExceptionPermissionDenied, ExceptionLoadingFailed, InterruptedException, ExceptionUnmatchedClosingParentheses {
+	public void testParse() throws IOException {
 
 		TCoffeeScoreFile parser = new TCoffeeScoreFile(SCORE_FILE.getPath(), FormatAdapter.FILE);
 
@@ -133,7 +133,7 @@ public class TCoffeeScoreFileTest {
 
 	
 	@Test
-	public void testGetAsList() throws IOException, ExceptionFileFormatOrSyntax, ParserConfigurationException, SAXException, ExceptionPermissionDenied, ExceptionLoadingFailed, InterruptedException, ExceptionUnmatchedClosingParentheses {
+	public void testGetAsList() throws IOException {
 		
           TCoffeeScoreFile parser = new TCoffeeScoreFile(SCORE_FILE.getPath(),FormatAdapter.FILE);
           assertTrue(parser.getWarningMessage(),parser.isValid());
@@ -152,7 +152,7 @@ public class TCoffeeScoreFileTest {
 	
 	
 	@Test
-	public void testGetAsArray() throws IOException, ExceptionFileFormatOrSyntax, ParserConfigurationException, SAXException, ExceptionPermissionDenied, ExceptionLoadingFailed, InterruptedException, ExceptionUnmatchedClosingParentheses {
+	public void testGetAsArray() throws IOException {
 		
           TCoffeeScoreFile parser = new TCoffeeScoreFile(SCORE_FILE.getPath(),FormatAdapter.FILE);
           assertTrue(parser.getWarningMessage(),parser.isValid());
@@ -181,7 +181,7 @@ public class TCoffeeScoreFileTest {
 	} 
 	
 	@Test
-	public void testHeightAndWidthWithResidueNumbers() throws IOException {
+	public void testHeightAndWidthWithResidueNumbers() throws Exception {
 		String file = "test/jalview/io/tcoffee.score_ascii_with_residue_numbers";
 		TCoffeeScoreFile result = new TCoffeeScoreFile(file, FormatAdapter.FILE);
 		assertTrue(result.isValid());