X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fio%2Fgff%2FExonerateHelperTest.java;h=28036b230ebf3597ced32ec59c692ab6d74924b5;hb=019a78415854a8c7fbfe0b566174ede7e69f24b8;hp=54d6eb24765f3f1ebf43eaa7851054d8b96b92e2;hpb=8f920d337154e092f5f9056ffde3cdf2735eca43;p=jalview.git diff --git a/test/jalview/io/gff/ExonerateHelperTest.java b/test/jalview/io/gff/ExonerateHelperTest.java index 54d6eb2..28036b2 100644 --- a/test/jalview/io/gff/ExonerateHelperTest.java +++ b/test/jalview/io/gff/ExonerateHelperTest.java @@ -15,8 +15,8 @@ import jalview.datamodel.Sequence; import jalview.datamodel.SequenceDummy; import jalview.datamodel.SequenceI; import jalview.gui.AlignFrame; +import jalview.io.DataSourceType; import jalview.io.FileLoader; -import jalview.io.FormatAdapter; import java.io.IOException; import java.util.ArrayList; @@ -239,10 +239,10 @@ public class ExonerateHelperTest FileLoader loader = new FileLoader(false); AlignFrame af = loader.LoadFileWaitTillLoaded( "examples/testdata/exonerateseqs.fa", - FormatAdapter.FILE); + DataSourceType.FILE); af.loadJalviewDataFile("examples/testdata/exonerateoutput.gff", - FormatAdapter.FILE, null, null); + DataSourceType.FILE, null, null); /* * verify one mapping to a dummy sequence, one to a real one