X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fio%2Fvcf%2FtestVcf.dat;h=77e070c072d403ffa289092639b6fdb2213f4232;hb=c60d055037dc8ce87f9f44ebb8909afe03de4618;hp=e9e6c226436350254d131a5973353f33c75aacce;hpb=43bee46f18100411bfa20508f7740e60dd525f4a;p=jalview.git

diff --git a/test/jalview/io/vcf/testVcf.dat b/test/jalview/io/vcf/testVcf.dat
index e9e6c22..77e070c 100644
--- a/test/jalview/io/vcf/testVcf.dat
+++ b/test/jalview/io/vcf/testVcf.dat
@@ -4,7 +4,7 @@
 ##INFO=<ID=AF_Female,Number=R,Type=Float,Description="Allele Frequency among Female genotypes, for each ALT allele, in the same order as listed">
 ##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
 ##INFO=<ID=CSQ,Number=.,Type=String,Description="Consequence annotations from Ensembl VEP. Format: Allele|Consequence|IMPACT|SYMBOL|Gene|Feature_type|Feature|BIOTYPE|PolyPhen">
-##reference=GRCh38
+##reference=/Homo_sapiens/GRCh38
 #CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO
 5	45051610	.	C	A	81.96	RF;AC0	AC=1;AF=0.1;AN=0;AF_Female=2;AB_MEDIAN=6.00000e-01;CSQ=A|missense_variant|MODIFIER|WASH7P|gene3|Transcript|transcript3|rna|Benign,A|downstream_gene_variant|MODIFIER|WASH7P|gene3|Transcript|transcript4|mrna|Bad
 5	45051614	.	C	T	1666.64	RF	AC=1;AF=0.2;AN=0;AF_Female=2;AB_MEDIAN=6.00000e-01;CSQ=T|missense_variant|MODIFIER|WASH7P|gene3|Transcript|transcript3|rna|Benign,T|downstream_gene_variant|MODIFIER|WASH7P|gene3|Transcript|transcript4|mrna|Bad