X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Frenderer%2FOverviewRendererTest.java;h=cdb69e34d94bef3ab538200e1f102bdb4618d63e;hb=13cb17a0bdff818a32d253e2199105d9def58796;hp=bc9c2e4685000b6fefa3d2f54686ee12672f984f;hpb=3f308bf567cb401b0f735c8f5e9ff57eea083011;p=jalview.git

diff --git a/test/jalview/renderer/OverviewRendererTest.java b/test/jalview/renderer/OverviewRendererTest.java
index bc9c2e4..cdb69e3 100644
--- a/test/jalview/renderer/OverviewRendererTest.java
+++ b/test/jalview/renderer/OverviewRendererTest.java
@@ -1,3 +1,23 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.renderer;
 
 import static org.testng.Assert.assertEquals;
@@ -19,25 +39,29 @@ import jalview.viewmodel.ViewportRanges;
 import java.awt.Color;
 
 import org.testng.annotations.Test;
+
 public class OverviewRendererTest
 {
 
   @Test
   public void testGetColumnColourFromSequence()
   {
-    OverviewResColourFinder cf = new OverviewResColourFinder(false,
-            Color.PINK, Color.green); // gapColour, hiddenColour
+    // gapColour, residueColour, hiddenColour
+    OverviewResColourFinder cf = new OverviewResColourFinder(
+            Color.PINK, Color.white, Color.green); 
     Sequence seq1 = new Sequence("seq1", "PQ-RL-");
     Sequence seq2 = new Sequence("seq2", "FVE");
     AlignmentI al = new Alignment(new SequenceI[] { seq1, seq2 });
     AlignmentViewport av = new AlignViewport(al);
-    OverviewDimensions od = new OverviewDimensionsShowHidden(new ViewportRanges(al), false);
+    OverviewDimensions od = new OverviewDimensionsShowHidden(
+            new ViewportRanges(al), false);
     ResidueShaderI rs = new ResidueShader(new ZappoColourScheme());
     FeatureRenderer fr = new FeatureRenderer(av);
     OverviewRenderer or = new OverviewRenderer(fr, od, al, rs, cf);
 
     // P is magenta (see ResidueProperties.zappo)
-    assertEquals(or.getColumnColourFromSequence(null, seq1, 0), Color.magenta.getRGB());
+    assertEquals(or.getColumnColourFromSequence(null, seq1, 0),
+            Color.magenta.getRGB());
     // Q is green
     assertEquals(or.getColumnColourFromSequence(null, seq1, 1),
             Color.green.getRGB());