X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Frenderer%2FOverviewResColourFinderTest.java;fp=test%2Fjalview%2Frenderer%2FOverviewResColourFinderTest.java;h=3931dbffc4e14e7605ecf39018e0d9c42272642b;hb=57738a1f3c19b1c3a00bd3ac5108f8cd0af32f99;hp=16875163b97e2fad660725bd749af1ddb65c1c04;hpb=e7338a61f3ce96dadf44ac80b2b32cc5ba4b94c8;p=jalview.git

diff --git a/test/jalview/renderer/OverviewResColourFinderTest.java b/test/jalview/renderer/OverviewResColourFinderTest.java
index 1687516..3931dbf 100644
--- a/test/jalview/renderer/OverviewResColourFinderTest.java
+++ b/test/jalview/renderer/OverviewResColourFinderTest.java
@@ -61,11 +61,9 @@ public class OverviewResColourFinderTest
 
     // gaps are grey, residues white
     assertEquals(Color.white, rcf.getResidueColour(true,
-            av.getResidueShading(),
-            null, seq, 0, null));
-    assertEquals(Color.lightGray, rcf
-            .getResidueColour(true, av.getResidueShading(), null, seq, 2,
-                    null));
+            av.getResidueShading(), null, seq, 0, null));
+    assertEquals(Color.lightGray, rcf.getResidueColour(true,
+            av.getResidueShading(), null, seq, 2, null));
 
     // unaffected by showBoxes setting
     assertEquals(Color.white, rcf.getResidueColour(false,
@@ -85,23 +83,18 @@ public class OverviewResColourFinderTest
     av.setGlobalColourScheme(new ZappoColourScheme());
 
     // @see ResidueProperties.zappo
-    assertEquals(Color.pink,
-            rcf.getResidueColour(true, av.getResidueShading(),
-            null, seq, 0, null)); // M
-    assertEquals(Color.green,
-            rcf.getResidueColour(true, av.getResidueShading(),
-            null, seq, 2, null)); // T
-    assertEquals(Color.magenta,
-            rcf.getResidueColour(true, av.getResidueShading(),
-            null, seq, 5, null)); // G
-    assertEquals(Color.orange,
-            rcf.getResidueColour(true, av.getResidueShading(),
-            null, seq, 12, null)); // F
+    assertEquals(Color.pink, rcf.getResidueColour(true,
+            av.getResidueShading(), null, seq, 0, null)); // M
+    assertEquals(Color.green, rcf.getResidueColour(true,
+            av.getResidueShading(), null, seq, 2, null)); // T
+    assertEquals(Color.magenta, rcf.getResidueColour(true,
+            av.getResidueShading(), null, seq, 5, null)); // G
+    assertEquals(Color.orange, rcf.getResidueColour(true,
+            av.getResidueShading(), null, seq, 12, null)); // F
 
     // gap colour not specified so gaps are lightGray
-    assertEquals(Color.lightGray, rcf
-            .getResidueColour(true, av.getResidueShading(), null, seq, 3,
-                    null));
+    assertEquals(Color.lightGray, rcf.getResidueColour(true,
+            av.getResidueShading(), null, seq, 3, null));
 
     // unaffected by showBoxes setting
     assertEquals(Color.pink, rcf.getResidueColour(false,
@@ -114,9 +107,8 @@ public class OverviewResColourFinderTest
             av.getResidueShading(), null, seq, 12, null)); // F
 
     // gap colour not specified so gaps are lightGray
-    assertEquals(Color.lightGray, rcf
-            .getResidueColour(false, av.getResidueShading(), null, seq, 3,
-                    null));
+    assertEquals(Color.lightGray, rcf.getResidueColour(false,
+            av.getResidueShading(), null, seq, 3, null));
 
   }
 
@@ -138,17 +130,15 @@ public class OverviewResColourFinderTest
     av.setGlobalColourScheme(new UserColourScheme(newColours));
 
     // gap colour not specified so gaps are lightGray
-    assertEquals(Color.lightGray, rcf
-            .getResidueColour(true, av.getResidueShading(), null, seq, 3,
-                    null));
+    assertEquals(Color.lightGray, rcf.getResidueColour(true,
+            av.getResidueShading(), null, seq, 3, null));
 
     newColours[23] = Color.pink;
     av.setGlobalColourScheme(new UserColourScheme(newColours));
 
     // gap colour specified as pink
     assertEquals(Color.pink, rcf.getResidueColour(true,
-            av.getResidueShading(),
-            null, seq, 3, null));
+            av.getResidueShading(), null, seq, 3, null));
 
     // unaffected by showBoxes setting
     // gap colour not specified so gaps are lightGray
@@ -169,7 +159,7 @@ public class OverviewResColourFinderTest
   {
     SequenceI seq = new Sequence("name", "MA--TVLGSPRAPAFF");
     AlignmentI al = new Alignment(new SequenceI[] { seq });
-    
+
     ColourSchemeI cs = new ZappoColourScheme();
     ArrayList<SequenceI> seqlist = new ArrayList<>();
     seqlist.add(seq);
@@ -178,10 +168,10 @@ public class OverviewResColourFinderTest
     al.addGroup(sg);
     SequenceGroup[] groups = new SequenceGroup[1];
     groups[0] = sg;
-    
+
     final AlignViewport av = new AlignViewport(al);
     ResidueColourFinder rcf = new OverviewResColourFinder();
-    
+
     // G in group specified as magenta in Zappo
     assertEquals(Color.magenta, rcf.getResidueColour(false,
             av.getResidueShading(), groups, seq, 7, null));
@@ -196,7 +186,7 @@ public class OverviewResColourFinderTest
 
     // use legacy colouring
     rcf = new OverviewResColourFinder(true, Color.blue, Color.red);
-  
+
     // G in group specified as magenta in Zappo
     assertEquals(Color.magenta, rcf.getResidueColour(false,
             av.getResidueShading(), groups, seq, 7, null));