X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Frenderer%2Fseqfeatures%2FFeatureRendererTest.java;h=dc86605ea6219b389045b6ade5a04793911a2472;hb=163ed5b997bbda48e4cdd950e87a8fe01baae7fb;hp=3e27aba99a5be13f452c15d21aec6cda19e910a7;hpb=c430867beda6dcf8236f59d1346ff4b026b0b62b;p=jalview.git diff --git a/test/jalview/renderer/seqfeatures/FeatureRendererTest.java b/test/jalview/renderer/seqfeatures/FeatureRendererTest.java index 3e27aba..dc86605 100644 --- a/test/jalview/renderer/seqfeatures/FeatureRendererTest.java +++ b/test/jalview/renderer/seqfeatures/FeatureRendererTest.java @@ -267,15 +267,20 @@ public class FeatureRendererTest fr.filterFeaturesForDisplay(features, null); // empty list, does nothing SequenceI seq = av.getAlignment().getSequenceAt(0); - SequenceFeature sf1 = new SequenceFeature("Cath", "", 6, 8, "group1"); + SequenceFeature sf1 = new SequenceFeature("Cath", "", 6, 8, Float.NaN, + "group1"); seq.addSequenceFeature(sf1); - SequenceFeature sf2 = new SequenceFeature("Cath", "", 5, 11, "group2"); + SequenceFeature sf2 = new SequenceFeature("Cath", "", 5, 11, 2f, + "group2"); seq.addSequenceFeature(sf2); - SequenceFeature sf3 = new SequenceFeature("Cath", "", 5, 11, "group3"); + SequenceFeature sf3 = new SequenceFeature("Cath", "", 5, 11, 3f, + "group3"); seq.addSequenceFeature(sf3); - SequenceFeature sf4 = new SequenceFeature("Cath", "", 6, 8, "group4"); + SequenceFeature sf4 = new SequenceFeature("Cath", "", 6, 8, 4f, + "group4"); seq.addSequenceFeature(sf4); - SequenceFeature sf5 = new SequenceFeature("Cath", "", 6, 9, "group4"); + SequenceFeature sf5 = new SequenceFeature("Cath", "", 6, 9, 5f, + "group4"); seq.addSequenceFeature(sf5); fr.findAllFeatures(true); @@ -329,6 +334,7 @@ public class FeatureRendererTest /* * no filtering of co-located features with graduated colour scheme + * filterFeaturesForDisplay does _not_ check colour threshold * sf2 is removed as its group is hidden */ features = seq.getSequenceFeatures();