X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fschemes%2FResiduePropertiesTest.java;h=28f39d858012fbd9df809ec33b54494c53c07628;hb=refs%2Fheads%2Fimprovement%2FJAL-3847_some_attempts_to_set_gradle_and_groovy_versions;hp=7fbad50bc9909d9fc1fcb2cfa1b5c9e80deca372;hpb=5f4e1e4c330b045e9c8bce28ee132a0fca3834d8;p=jalview.git

diff --git a/test/jalview/schemes/ResiduePropertiesTest.java b/test/jalview/schemes/ResiduePropertiesTest.java
index 7fbad50..28f39d8 100644
--- a/test/jalview/schemes/ResiduePropertiesTest.java
+++ b/test/jalview/schemes/ResiduePropertiesTest.java
@@ -23,8 +23,6 @@ package jalview.schemes;
 import static org.testng.AssertJUnit.assertEquals;
 import static org.testng.AssertJUnit.assertNull;
 
-import jalview.gui.JvOptionPane;
-
 import java.util.Collections;
 import java.util.List;
 import java.util.Map;
@@ -32,6 +30,8 @@ import java.util.Map;
 import org.testng.annotations.BeforeClass;
 import org.testng.annotations.Test;
 
+import jalview.gui.JvOptionPane;
+
 public class ResiduePropertiesTest
 {
 
@@ -222,7 +222,8 @@ public class ResiduePropertiesTest
      */
     residues = ResidueProperties.getResidues(true, true);
     Collections.sort(residues);
-    assertEquals("[A, C, G, I, N, R, T, U, X, Y]", residues.toString());
+    assertEquals("[A, B, C, D, G, H, I, K, M, N, R, S, T, U, V, W, X, Y]",
+            residues.toString());
   }
 
   @Test(groups = { "Functional" })
@@ -1569,6 +1570,16 @@ public class ResiduePropertiesTest
   }
 
   @Test(groups = { "Functional" })
+  public void testGetDssp3State()
+  {
+    assertNull(ResidueProperties.getDssp3state(null));
+    assertEquals("", ResidueProperties.getDssp3state(""));
+    String foo = "0123 []<>abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ";
+    String bar = "                                    E  E HHH                 ";
+    assertEquals(bar, ResidueProperties.getDssp3state(foo));
+  }
+
+  @Test(groups = { "Functional" })
   public void testPhysicoChemicalProperties()
   {
     checkProperty("aromatic", "FYWH-*");