X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fstructure%2FStructureSelectionManagerTest.java;fp=test%2Fjalview%2Fstructure%2FStructureSelectionManagerTest.java;h=8108cd8905f35a7efa7b8800136444e6b2ce6fcd;hb=3efc513242af226b2829a887afdb65fb4c6a1bb7;hp=dab692f6e7fc5e2c594d6a0ec33fd2a45b467a7a;hpb=e82c0bb610425c3829037bec88b6c03509d07e36;p=jalview.git diff --git a/test/jalview/structure/StructureSelectionManagerTest.java b/test/jalview/structure/StructureSelectionManagerTest.java index dab692f..8108cd8 100644 --- a/test/jalview/structure/StructureSelectionManagerTest.java +++ b/test/jalview/structure/StructureSelectionManagerTest.java @@ -80,7 +80,7 @@ public class StructureSelectionManagerTest extends Jalview2xmlBase public void setUp() { StructureImportSettings.setShowSeqFeatures(true); - ssm = new StructureSelectionManager(); + ssm = StructureSelectionManager.getStructureSelectionManager(null); } @Test(groups = { "Functional" }) @@ -155,7 +155,7 @@ public class StructureSelectionManagerTest extends Jalview2xmlBase SequenceI seq = new Sequence( "1GAQ|B", "ATYNVKLITPEGEVELQVPDDVYILDQAEEDGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSYLDDGQIADGWVLTCHAYPTSDVVIETHKEEELTGA"); - StructureSelectionManager sm = new StructureSelectionManager(); + StructureSelectionManager sm = StructureSelectionManager.getStructureSelectionManager(null); sm.setProcessSecondaryStructure(true); sm.setAddTempFacAnnot(true); StructureFile pmap = sm.setMapping(true, new SequenceI[] { seq }, @@ -206,7 +206,7 @@ public class StructureSelectionManagerTest extends Jalview2xmlBase SequenceI seq = new Sequence("4IM2|A", "LDFCIRNIEKTVMGEISDIHTKLLRLSSSQGTIE"); String P4IM2_MISSING = "examples/testdata/4IM2_missing.pdb"; - StructureSelectionManager sm = new StructureSelectionManager(); + StructureSelectionManager sm = StructureSelectionManager.getStructureSelectionManager(null); sm.setProcessSecondaryStructure(true); sm.setAddTempFacAnnot(true); StructureFile pmap = sm.setMapping(true, new SequenceI[] { seq },