X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Furls%2FIdentifiersUrlProviderTest.java;h=eed58b0eeee55c1d15ef62785513c0acc9c8145a;hb=1a7569b26f3f24011b33f0551ecbf5377b1fb85b;hp=9c8c96a877689cff187a04cb59f78af4451ba378;hpb=64f19a3315b24ae0084cdc5ca8d47c9485040588;p=jalview.git diff --git a/test/jalview/urls/IdentifiersUrlProviderTest.java b/test/jalview/urls/IdentifiersUrlProviderTest.java index 9c8c96a..eed58b0 100644 --- a/test/jalview/urls/IdentifiersUrlProviderTest.java +++ b/test/jalview/urls/IdentifiersUrlProviderTest.java @@ -38,8 +38,7 @@ import org.testng.annotations.Test; public class IdentifiersUrlProviderTest { - // Test identifiers.org download file - private static final String testIdOrgFile = "[{\"id\":\"MIR:00000002\",\"name\":\"ChEBI\",\"pattern\":\"^CHEBI:\\d+$\"," + private static final String testIdOrgFile = "{\"Local\": [{\"id\":\"MIR:00000002\",\"name\":\"ChEBI\",\"pattern\":\"^CHEBI:\\d+$\"," + "\"definition\":\"Chemical Entities of Biological Interest (ChEBI)\",\"prefix\":\"chebi\"," + "\"url\":\"http://identifiers.org/chebi\"},{\"id\":\"MIR:00000005\",\"name\":\"UniProt Knowledgebase\"," + "\"pattern\":\"^([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\\.\\d+)?$\"," @@ -47,7 +46,7 @@ public class IdentifiersUrlProviderTest + "{\"id\":\"MIR:00000011\",\"name\":\"InterPro\",\"pattern\":\"^IPR\\d{6}$\",\"definition\":\"InterPro\",\"prefix\":\"interpro\"," + "\"url\":\"http://identifiers.org/interpro\"}," + "{\"id\":\"MIR:00000372\",\"name\":\"ENA\",\"pattern\":\"^[A-Z]+[0-9]+(\\.\\d+)?$\",\"definition\":\"The European Nucleotide Archive (ENA),\"" - + "\"prefix\":\"ena.embl\",\"url\":\"http://identifiers.org/ena.embl\"}]"; + + "\"prefix\":\"ena.embl\",\"url\":\"http://identifiers.org/ena.embl\"}]}"; private static final String[] dlinks = { "UniProt Knowledgebase|http://identifiers.org/uniprot/$DB_ACCESSION$|uniprot",