X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fws%2Fdbsources%2FPDBRestClientTest.java;h=401f4c9edddadfba2bcd7373621cf10b14b06053;hb=53ff9242cb709fe1e8470c5e88ecf8a8ae783b19;hp=9ae5b26488277af38d5873bae41bbafe4536a1f5;hpb=28fda83cbef0c9c82cd09a343af4e1721085c104;p=jalview.git
diff --git a/test/jalview/ws/dbsources/PDBRestClientTest.java b/test/jalview/ws/dbsources/PDBRestClientTest.java
index 9ae5b26..401f4c9 100644
--- a/test/jalview/ws/dbsources/PDBRestClientTest.java
+++ b/test/jalview/ws/dbsources/PDBRestClientTest.java
@@ -1,3 +1,23 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.ws.dbsources;
import static org.testng.AssertJUnit.assertEquals;
@@ -34,7 +54,7 @@ import com.sun.jersey.api.client.config.DefaultClientConfig;
public class PDBRestClientTest
{
- @BeforeMethod(alwaysRun = true)
+ @BeforeMethod(alwaysRun = true)
public void setUp() throws Exception
{
}
@@ -44,8 +64,7 @@ public class PDBRestClientTest
{
}
- @Test(groups =
- { "External", "Network" })
+ @Test(groups = { "External", "Network" })
public void executeRequestTest()
{
List wantedFields = new ArrayList();
@@ -77,7 +96,7 @@ public class PDBRestClientTest
assertTrue(response.getSearchSummary().size() > 99);
}
- @Test(groups ={ "Functional" })
+ @Test(groups = { "Functional" })
public void getPDBDocFieldsAsCommaDelimitedStringTest()
{
List wantedFields = new ArrayList();
@@ -94,8 +113,7 @@ public class PDBRestClientTest
assertEquals("", expectedResult, actualResult);
}
- @Test(groups =
- { "External, Network" })
+ @Test(groups = { "External, Network" })
public void parsePDBJsonExceptionStringTest()
{
List wantedFields = new ArrayList();
@@ -133,8 +151,9 @@ public class PDBRestClientTest
assertEquals(expectedErrorMsg, parsedErrorResponse);
}
- @Test(groups =
- { "External", "Network" }, expectedExceptions = Exception.class)
+ @Test(
+ groups = { "External", "Network" },
+ expectedExceptions = Exception.class)
public void testForExpectedRuntimeException() throws Exception
{
List wantedFields = new ArrayList();
@@ -147,8 +166,7 @@ public class PDBRestClientTest
new PDBRestClient().executeRequest(request);
}
- @Test(groups =
- { "External" })
+ @Test(groups = { "External" })
public void parsePDBJsonResponseTest()
{
List wantedFields = new ArrayList();
@@ -177,7 +195,7 @@ public class PDBRestClientTest
assertTrue(response.getSearchSummary().size() == 14);
}
- @Test(groups ={ "Functional" })
+ @Test(groups = { "Functional" })
public void getPDBIdColumIndexTest()
{
List wantedFields = new ArrayList();
@@ -190,8 +208,7 @@ public class PDBRestClientTest
assertEquals(4, PDBRestClient.getPDBIdColumIndex(wantedFields, false));
}
- @Test(groups =
- { "External" })
+ @Test(groups = { "External" })
public void externalServiceIntegrationTest()
{
ClientConfig clientConfig = new DefaultClientConfig();
@@ -247,7 +264,7 @@ public class PDBRestClientTest
if (pdbJsonDoc.get(field.getCode()) == null)
{
// System.out.println(">>>\t" + field.getCode());
- assertTrue(field.getClass()
+ assertTrue(field.getCode()
+ " has been removed from PDB doc Entity",
!pdbJsonResponseString.contains(field.getCode()));
}
@@ -274,7 +291,7 @@ public class PDBRestClientTest
sb.append(line);
sb.append(System.lineSeparator());
line = br.readLine();
- }
+ }
fileContent = sb.toString();
} finally
{