X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fws%2Fdbsources%2FXfamFetcherTest.java;h=8a591b0abe6867ac10cdcb7589fe6d8570c4ac61;hb=00e3cf6993daba7e310af0bf75b4a64ba900f837;hp=2f2848459a5a64c155c5a753a077b59dc07a8d56;hpb=5f4e1e4c330b045e9c8bce28ee132a0fca3834d8;p=jalview.git diff --git a/test/jalview/ws/dbsources/XfamFetcherTest.java b/test/jalview/ws/dbsources/XfamFetcherTest.java index 2f28484..8a591b0 100644 --- a/test/jalview/ws/dbsources/XfamFetcherTest.java +++ b/test/jalview/ws/dbsources/XfamFetcherTest.java @@ -49,26 +49,36 @@ public class XfamFetcherTest Assert.assertTrue(seedrf.getHeight() > 1, "Seed Alignment for " + rfs.getTestQuery() + " didn't contain more than one sequence."); + Assert.assertTrue(seedrf.getProperties().size() > 0, + "Seed Alignment for " + rfs.getTestQuery() + + " didn't have any properties."); + } @Test(groups = { "External" }) public void testPfamFullAndSeed() throws Exception { - PfamFull pff = new PfamFull(); + Pfam pff = new PfamFull(); PfamSeed pfseed = new PfamSeed(); AlignmentI fullpf = pff.getSequenceRecords(pff.getTestQuery()); Assert.assertNotNull(fullpf, "Full Alignment for " + pff.getTestQuery() + " didn't retrieve."); - Assert.assertTrue(fullpf.getHeight() > 1, - "Full Alignment for " + pff.getTestQuery() - + " didn't have more than one sequence."); + Assert.assertTrue(fullpf.getHeight() > 1, "Full Alignment for " + + pff.getTestQuery() + " didn't have more than one sequence."); AlignmentI seedpf = pfseed.getSequenceRecords(pff.getTestQuery()); Assert.assertNotNull(seedpf, "Seed Alignment for " + pff.getTestQuery() + " didn't retrieve."); + Assert.assertTrue(seedpf.getProperties().size() > 0, + "Seed Alignment for " + pfseed.getTestQuery() + + " didn't have any properties."); Assert.assertTrue(seedpf.getHeight() < fullpf.getHeight(), "Expected Full alignment to have more sequences than seed for " + pff.getTestQuery()); + Assert.assertTrue(fullpf.getProperties().size() > 0, + "Full Alignment for " + pff.getTestQuery() + + " didn't have any properties."); + } }