X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fws%2Fjabaws%2FDisorderAnnotExportImport.java;h=2d317e47e7d81aa541b9797740bbe78835c058f1;hb=95ebbef7b78bf266a8252bd479510be3c80cd234;hp=3573f507ec2d10d6326da0ea2c1d74dfe5169f4a;hpb=3a83e3b795ee674956d0ce18b9a89a825f7b5a8e;p=jalview.git diff --git a/test/jalview/ws/jabaws/DisorderAnnotExportImport.java b/test/jalview/ws/jabaws/DisorderAnnotExportImport.java index 3573f50..2d317e4 100644 --- a/test/jalview/ws/jabaws/DisorderAnnotExportImport.java +++ b/test/jalview/ws/jabaws/DisorderAnnotExportImport.java @@ -138,7 +138,7 @@ public class DisorderAnnotExportImport { try { - String aligfileout = FileFormat.Pfam.getAlignmentFile().print( + String aligfileout = FileFormat.Pfam.getWriter(al).print( al.getSequencesArray(), true); String anfileout = new AnnotationFile() .printAnnotationsForAlignment(al);