X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fws%2Fjabaws%2FMinJabawsClientTests.java;fp=test%2Fjalview%2Fws%2Fjabaws%2FMinJabawsClientTests.java;h=0c25cdbbc397bd3b08ccc5cc227d8d929c9667c7;hb=8ba93f7655ea7165579539158b6a5eb076135bba;hp=a938dd66403af1f12dcf213306b3c64a1dff76d6;hpb=1098fd737b5ff291ea83768404036d388f43d0b8;p=jalview.git diff --git a/test/jalview/ws/jabaws/MinJabawsClientTests.java b/test/jalview/ws/jabaws/MinJabawsClientTests.java index a938dd6..0c25cdb 100644 --- a/test/jalview/ws/jabaws/MinJabawsClientTests.java +++ b/test/jalview/ws/jabaws/MinJabawsClientTests.java @@ -5,7 +5,6 @@ import static org.junit.Assert.fail; import java.util.ArrayList; import java.util.List; -import java.util.function.Consumer; import org.junit.Test; @@ -51,32 +50,40 @@ public class MinJabawsClientTests { } String jobid = msaservice.align(iseqs); - if (jobid != null) { - JobStatus js = null; - do { - try { - Thread.sleep(500); - } catch (InterruptedException q) { - } - ; - js = msaservice.getJobStatus(jobid); - } while (!js.equals(JobStatus.FAILED) - && !js.equals(JobStatus.CANCELLED) - && !js.equals(JobStatus.FINISHED)); - assertEquals("Trial alignment failed. State was " + js.name(), - js, JobStatus.FINISHED); - assertEquals( - "Mismatch in number of input and result sequences - assume alignment service wasn't interacted with correctly", - msaservice.getResult(jobid).getSequences().size(), - iseqs.size()); - msaservice.getResult(jobid).getSequences() - .forEach(new Consumer() { - @Override - public void accept(FastaSequence t) { - System.out.println(">"+t.getId()); - System.out.println(t.getFormattedFasta()); - } - }); + if (jobid != null) + { + JobStatus js = null; + do + { + try + { + Thread.sleep(500); + } catch (InterruptedException q) + { + } + ; + js = msaservice.getJobStatus(jobid); + } while (!js.equals(JobStatus.FAILED) + && !js.equals(JobStatus.CANCELLED) + && !js.equals(JobStatus.FINISHED)); + assertEquals("Trial alignment failed. State was " + js.name(), js, + JobStatus.FINISHED); + assertEquals( + "Mismatch in number of input and result sequences - assume alignment service wasn't interacted with correctly", + msaservice.getResult(jobid).getSequences().size(), + iseqs.size()); + for (FastaSequence t : msaservice.getResult(jobid).getSequences()) + { + System.out.println(">" + t.getId()); + System.out.println(t.getFormattedFasta()); + } + // .forEach(new Consumer() { + // @Override + // public void accept(FastaSequence t) { + // System.out.println(">"+t.getId()); + // System.out.println(t.getFormattedFasta()); + // } + // }); } }