X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fws%2Fjabaws%2FRNAStructExportImport.java;h=6b92b85a65ca192fea5eabaf84bf02a158bcc298;hb=3412b273e964fb1a9d22564b04a5f0c827ec2461;hp=1475b4e4dd6cdc5a59118719d1515bcffbaeef55;hpb=4bba61a3c701f83bdcb6707c4d9f17a1f5faaa04;p=jalview.git diff --git a/test/jalview/ws/jabaws/RNAStructExportImport.java b/test/jalview/ws/jabaws/RNAStructExportImport.java index 1475b4e..6b92b85 100644 --- a/test/jalview/ws/jabaws/RNAStructExportImport.java +++ b/test/jalview/ws/jabaws/RNAStructExportImport.java @@ -20,9 +20,23 @@ */ package jalview.ws.jabaws; -import static org.junit.Assert.assertNotNull; -import static org.junit.Assert.assertTrue; -import static org.junit.Assert.fail; +import static org.testng.AssertJUnit.assertNotNull; +import static org.testng.AssertJUnit.assertTrue; + +import java.awt.Component; +import java.util.ArrayList; +import java.util.List; + +import javax.swing.JMenu; +import javax.swing.JMenuItem; + +import org.testng.Assert; +import org.testng.annotations.AfterClass; +import org.testng.annotations.BeforeClass; +import org.testng.annotations.Test; + +import compbio.metadata.WrongParameterException; + import jalview.datamodel.AlignmentAnnotation; import jalview.datamodel.AlignmentI; import jalview.gui.Jalview2XML; @@ -35,20 +49,6 @@ import jalview.ws.jws2.SequenceAnnotationWSClient; import jalview.ws.jws2.jabaws2.Jws2Instance; import jalview.ws.params.AutoCalcSetting; -import java.awt.Component; -import java.util.ArrayList; -import java.util.List; - -import javax.swing.JMenu; -import javax.swing.JMenuItem; - -import org.junit.AfterClass; -import org.junit.Assert; -import org.junit.BeforeClass; -import org.junit.Test; - -import compbio.metadata.WrongParameterException; - public class RNAStructExportImport { public static String testseqs = "examples/RF00031_folded.stk"; @@ -81,7 +81,7 @@ public class RNAStructExportImport if (rnaalifoldws == null) { - fail("no web service"); + Assert.fail("no web service"); } jalview.io.FileLoader fl = new jalview.io.FileLoader(false); @@ -144,7 +144,9 @@ public class RNAStructExportImport { if (aa.isRNA()) { - Assert.assertTrue("Did not create valid structure from RNAALiFold prediction", aa.isValidStruc()); + assertTrue( + "Did not create valid structure from RNAALiFold prediction", + aa.isValidStruc()); } } } @@ -216,7 +218,7 @@ public class RNAStructExportImport { e.printStackTrace(); } - fail("Test " + Assert.fail("Test " + testname + "\nCouldn't complete Annotation file roundtrip input/output/input test."); } @@ -235,7 +237,7 @@ public class RNAStructExportImport rg.setValue("292"); } catch (WrongParameterException q) { - fail("Couldn't set the temperature parameter " + Assert.fail("Couldn't set the temperature parameter " + q.getStackTrace()); } opts.add(rg);