X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fws%2Fseqfetcher%2FDbRefFetcherTest.java;h=d9b1d90122c2248caa7266eb34eaef57276216ff;hb=28fda83cbef0c9c82cd09a343af4e1721085c104;hp=302c0f72a8039db459584fb4784629c4cd11dc1a;hpb=3412b273e964fb1a9d22564b04a5f0c827ec2461;p=jalview.git diff --git a/test/jalview/ws/seqfetcher/DbRefFetcherTest.java b/test/jalview/ws/seqfetcher/DbRefFetcherTest.java index 302c0f7..d9b1d90 100644 --- a/test/jalview/ws/seqfetcher/DbRefFetcherTest.java +++ b/test/jalview/ws/seqfetcher/DbRefFetcherTest.java @@ -23,11 +23,6 @@ package jalview.ws.seqfetcher; import static org.testng.AssertJUnit.assertEquals; import static org.testng.AssertJUnit.assertNotNull; import static org.testng.AssertJUnit.assertTrue; -import org.testng.annotations.AfterClass; -import org.testng.annotations.Test; -import org.testng.annotations.BeforeClass; -import java.util.ArrayList; -import java.util.List; import jalview.analysis.CrossRef; import jalview.datamodel.AlignmentI; @@ -36,6 +31,13 @@ import jalview.datamodel.DBRefSource; import jalview.util.DBRefUtils; import jalview.ws.SequenceFetcher; +import java.util.ArrayList; +import java.util.List; + +import org.testng.annotations.AfterClass; +import org.testng.annotations.BeforeClass; +import org.testng.annotations.Test; + /** * @author jimp * @@ -46,7 +48,7 @@ public class DbRefFetcherTest /** * @throws java.lang.Exception */ - @BeforeClass + @BeforeClass(alwaysRun = true) public static void setUpBeforeClass() throws Exception { jalview.bin.Cache.initLogger(); @@ -60,7 +62,7 @@ public class DbRefFetcherTest { } - @Test + @Test(groups ={ "Functional" }) public void testStandardProtDbs() { String[] defdb = DBRefSource.PROTEINDBS; @@ -97,7 +99,8 @@ public class DbRefFetcherTest uniprot != null && i < 2); } - @Test + @Test(groups = + { "External" }) public void testEmblUniprotProductRecovery() throws Exception { String retrievalId = "CAA23748"; // "V00488"; @@ -106,7 +109,8 @@ public class DbRefFetcherTest verifyProteinNucleotideXref(retrievalId, embl); } - @Test + @Test(groups = + { "External" }) public void testEmblCDSUniprotProductRecovery() throws Exception { String retrievalId = "AAH29712";