X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=testsrc%2Fcompbio%2Fmetadata%2FAllTestSuit.java;h=4ae260eaada313778f87f7505fd13f445596fa48;hb=543657b077b18b8171fa5f3996daafb4a0b196f7;hp=633e30b7f0906e62c9978155454cc81aaf23a3e5;hpb=fab6bab770b548a0c99ed6f5dfb46f5aa99f67c7;p=jabaws.git

diff --git a/testsrc/compbio/metadata/AllTestSuit.java b/testsrc/compbio/metadata/AllTestSuit.java
index 633e30b..4ae260e 100644
--- a/testsrc/compbio/metadata/AllTestSuit.java
+++ b/testsrc/compbio/metadata/AllTestSuit.java
@@ -32,26 +32,27 @@ public class AllTestSuit {
 			.getPresets(ClustalW.class);
 	public static final RunnerConfig<ClustalW> CLUSTAL_PARAMETERS = Util
 			.getSupportedOptions(ClustalW.class);
-	public static final LimitsManager<ClustalW> CLUSTAL_LIMITS = Util
-			.getLimits(ClustalW.class);
+	public static final LimitsManager<ClustalW> CLUSTAL_LIMITS = compbio.engine.client.Util
+			.getLimits(new ClustalW().getType());
 
 	public static final PresetManager<Tcoffee> TCOFFEE_PRESETS = Util
 			.getPresets(Tcoffee.class);
 	public static final RunnerConfig<Tcoffee> TCOFFEE_PARAMETERS = Util
 			.getSupportedOptions(Tcoffee.class);
-	public static final LimitsManager<Tcoffee> TCOFFEE_LIMITS = Util
-			.getLimits(Tcoffee.class);
+	public static final LimitsManager<Tcoffee> TCOFFEE_LIMITS = compbio.engine.client.Util
+			.getLimits(new Tcoffee().getType());
 
 	public static final PresetManager<Muscle> MUSCLE_PRESETS = Util
 			.getPresets(Muscle.class);
 	public static final RunnerConfig<Muscle> MUSCLE_PARAMETERS = Util
 			.getSupportedOptions(Muscle.class);
-	public static final LimitsManager<Muscle> MUSCLE_LIMITS = Util
-			.getLimits(Muscle.class);
+	public static final LimitsManager<Muscle> MUSCLE_LIMITS = compbio.engine.client.Util
+			.getLimits(new Muscle().getType());
 
 	public final static String test_group_cluster = "cluster";
 	public final static String test_group_runner = "runner";
 	public final static String test_group_non_windows = "non_windows";
+	public final static String test_group_windows_only = "windows_only";
 	public final static String test_group_engine = "engine";
 	public final static String test_group_long = "performance";
 
@@ -70,7 +71,7 @@ public class AllTestSuit {
 	// For cluster execution paths MUST BE ABSOLUTE as cluster hosts will not be
 	// able to access the task otherwise
 	public static final String OUTPUT_DIR_ABSOLUTE = AllTestSuit.CURRENT_DIRECTORY
-			+ File.separator + "jobsout" + File.separator;
+			+ File.separator + "local_jobsout" + File.separator;
 
 	public static final String RUNNER_TEST_LOGGER = "RunnerLogger";