X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=testsrc%2Ftestdata%2Fljobs%2FClustalW%23100368900075204%2FRunnerConfig.xml;fp=testsrc%2Ftestdata%2Fljobs%2FClustalW%23100368900075204%2FRunnerConfig.xml;h=9131a498a102b507772f68756c5c9e713b214ea4;hb=7a5ab825edefa83e8c063359dd86a52dee66b8ef;hp=0000000000000000000000000000000000000000;hpb=451b60b868fc003d2b02a6f453461f365eb83f62;p=jabaws.git

diff --git a/testsrc/testdata/ljobs/ClustalW#100368900075204/RunnerConfig.xml b/testsrc/testdata/ljobs/ClustalW#100368900075204/RunnerConfig.xml
new file mode 100644
index 0000000..9131a49
--- /dev/null
+++ b/testsrc/testdata/ljobs/ClustalW#100368900075204/RunnerConfig.xml
@@ -0,0 +1,53 @@
+<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
+<runConfiguration>
+    <taskId>ClustalW#100368900075204</taskId>
+    <workDirectory>/cluster/gjb_lab/fc/www-jws2/jaba/local_jobsout/ClustalW#100368900075204</workDirectory>
+    <parameters>
+        <paramList>
+            <entry>
+                <key>-OUTORDER</key>
+                <value>
+                    <position>-1</position>
+                    <name>-OUTORDER</name>
+                    <value>ALIGNED</value>
+                </value>
+            </entry>
+            <entry>
+                <key>-QUIET</key>
+                <value>
+                    <position>-1</position>
+                    <name>-QUIET</name>
+                </value>
+            </entry>
+            <entry>
+                <key>-STATS</key>
+                <value>
+                    <position>-1</position>
+                    <name>-STATS</name>
+                    <value>stat.log</value>
+                </value>
+            </entry>
+            <entry>
+                <key>-INFILE</key>
+                <value>
+                    <position>-1</position>
+                    <name>-INFILE</name>
+                    <value>input.txt</value>
+                </value>
+            </entry>
+            <entry>
+                <key>-OUTFILE</key>
+                <value>
+                    <position>-1</position>
+                    <name>-OUTFILE</name>
+                    <value>output.txt</value>
+                </value>
+            </entry>
+        </paramList>
+        <nameValueSeparator>=</nameValueSeparator>
+    </parameters>
+    <error>error.txt</error>
+    <output>output.txt</output>
+    <input>/cluster/gjb_lab/fc/www-jws2/jaba/local_jobsout/ClustalW#100368900075204/input.txt</input>
+    <runnerClassName>compbio.runner.msa.ClustalW</runnerClassName>
+</runConfiguration>