X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=utils%2FHelpLinksChecker.java;h=1279b314403927dd2511864ea19afb90091800d4;hb=1eda02547f8519e1dff46dac06734cba6c77b97f;hp=7c57cc7b5806f794d83365e20f5a8f46b6b4e482;hpb=72da885aa401e932e73af4a554ea338cd5015efc;p=jalview.git

diff --git a/utils/HelpLinksChecker.java b/utils/HelpLinksChecker.java
index 7c57cc7..1279b31 100644
--- a/utils/HelpLinksChecker.java
+++ b/utils/HelpLinksChecker.java
@@ -34,7 +34,7 @@ import java.util.Map;
  * @author gmcarstairs
  *
  */
-public class HelpLinksChecker
+public class HelpLinksChecker implements BufferedLineReader.LineCleaner
 {
   private static final String HELP_HS = "help.hs";
 
@@ -358,7 +358,8 @@ public class HelpLinksChecker
     try
     {
       BufferedReader br = new BufferedReader(new FileReader(hrefFile));
-      String data = br.readLine();
+      BufferedLineReader blr = new BufferedLineReader(br, 3, this);
+      String data = blr.read();
       while (data != null)
       {
         if (data.contains(nameAnchor) || data.contains(idAnchor))
@@ -366,7 +367,7 @@ public class HelpLinksChecker
           found = true;
           break;
         }
-        data = br.readLine();
+        data = blr.read();
       }
       br.close();
     } catch (IOException e)
@@ -544,4 +545,14 @@ public class HelpLinksChecker
     }
     return value;
   }
+
+  /**
+   * Trim whitespace from concatenated lines but preserve one space for valid
+   * parsing
+   */
+  @Override
+  public String cleanLine(String l)
+  {
+    return l.trim() + " ";
+  }
 }