X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=utils%2Fgff2annot.pl;h=af4dfc56bee39a473d18de230b445acb2dc2a649;hb=7384a101e11711490956c31fcff4efb556d21c69;hp=0ff1d365e2b99b1cf9729e6c29e37e2e0d751394;hpb=3dd0bf5e98edf4cd9b43a506ea219fde1a6084f3;p=jalview.git

diff --git a/utils/gff2annot.pl b/utils/gff2annot.pl
index 0ff1d36..af4dfc5 100755
--- a/utils/gff2annot.pl
+++ b/utils/gff2annot.pl
@@ -49,7 +49,10 @@ gff2annot.pl
 
 =head2 SYNOPSIS
 
-gff2annot.pl [one or more files containing gff annotation]
+
+  gff2annot.pl [one or more files containing gff annotation]
+
+Generates a nominally usable Jalview Annotation file on B<STDOUT> from arbitrary GFF annotation lines.
 
 =head2 DESCRIPTION
 
@@ -74,7 +77,7 @@ Passing some GFF annotation through STDIN:
   Seq2 blasty significant_hsp 1 5 0.9 + 1 link http://mylink/
   Seq2 blastz significant_hsp 1 5 0.9
   Seq3 blastx significant_hsp 50 70
-  <Control^D>
+  <Control^D/Z>
 
 Produces