X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=webservices%2Fcompbio%2Fws%2Fserver%2Fresource%2FClustalWS.wsdl;h=61508acba43e975786c3be6e7c5d528ab6828a2f;hb=a966c1a63f4365f34a0567514dee6d1bc4d3af91;hp=d317bacb10bb46f4de0dd9e5d59bce21f21ae142;hpb=f500c782a6b1aa1bfcc8aae17e466b35fe59624e;p=jabaws.git

diff --git a/webservices/compbio/ws/server/resource/ClustalWS.wsdl b/webservices/compbio/ws/server/resource/ClustalWS.wsdl
index d317bac..61508ac 100644
--- a/webservices/compbio/ws/server/resource/ClustalWS.wsdl
+++ b/webservices/compbio/ws/server/resource/ClustalWS.wsdl
@@ -15,11 +15,11 @@
   <message name="ResultNotAvailableException">
     <part name="fault" element="tns:ResultNotAvailableException"/>
   </message>
-  <message name="presetAlign">
-    <part name="parameters" element="tns:presetAlign"/>
+  <message name="align">
+    <part name="parameters" element="tns:align"/>
   </message>
-  <message name="presetAlignResponse">
-    <part name="parameters" element="tns:presetAlignResponse"/>
+  <message name="alignResponse">
+    <part name="parameters" element="tns:alignResponse"/>
   </message>
   <message name="UnsupportedRuntimeException">
     <part name="fault" element="tns:UnsupportedRuntimeException"/>
@@ -30,6 +30,12 @@
   <message name="JobSubmissionException">
     <part name="fault" element="tns:JobSubmissionException"/>
   </message>
+  <message name="presetAlign">
+    <part name="parameters" element="tns:presetAlign"/>
+  </message>
+  <message name="presetAlignResponse">
+    <part name="parameters" element="tns:presetAlignResponse"/>
+  </message>
   <message name="WrongParameterException">
     <part name="fault" element="tns:WrongParameterException"/>
   </message>
@@ -39,11 +45,11 @@
   <message name="customAlignResponse">
     <part name="parameters" element="tns:customAlignResponse"/>
   </message>
-  <message name="align">
-    <part name="parameters" element="tns:align"/>
+  <message name="cancelJob">
+    <part name="parameters" element="tns:cancelJob"/>
   </message>
-  <message name="alignResponse">
-    <part name="parameters" element="tns:alignResponse"/>
+  <message name="cancelJobResponse">
+    <part name="parameters" element="tns:cancelJobResponse"/>
   </message>
   <message name="pullExecStatistics">
     <part name="parameters" element="tns:pullExecStatistics"/>
@@ -51,12 +57,6 @@
   <message name="pullExecStatisticsResponse">
     <part name="parameters" element="tns:pullExecStatisticsResponse"/>
   </message>
-  <message name="cancelJob">
-    <part name="parameters" element="tns:cancelJob"/>
-  </message>
-  <message name="cancelJobResponse">
-    <part name="parameters" element="tns:cancelJobResponse"/>
-  </message>
   <message name="getJobStatus">
     <part name="parameters" element="tns:getJobStatus"/>
   </message>
@@ -69,11 +69,11 @@
   <message name="getLimitResponse">
     <part name="parameters" element="tns:getLimitResponse"/>
   </message>
-  <message name="getRunnerOptions">
-    <part name="parameters" element="tns:getRunnerOptions"/>
+  <message name="getLimits">
+    <part name="parameters" element="tns:getLimits"/>
   </message>
-  <message name="getRunnerOptionsResponse">
-    <part name="parameters" element="tns:getRunnerOptionsResponse"/>
+  <message name="getLimitsResponse">
+    <part name="parameters" element="tns:getLimitsResponse"/>
   </message>
   <message name="getPresets">
     <part name="parameters" element="tns:getPresets"/>
@@ -81,11 +81,11 @@
   <message name="getPresetsResponse">
     <part name="parameters" element="tns:getPresetsResponse"/>
   </message>
-  <message name="getLimits">
-    <part name="parameters" element="tns:getLimits"/>
+  <message name="getRunnerOptions">
+    <part name="parameters" element="tns:getRunnerOptions"/>
   </message>
-  <message name="getLimitsResponse">
-    <part name="parameters" element="tns:getLimitsResponse"/>
+  <message name="getRunnerOptionsResponse">
+    <part name="parameters" element="tns:getRunnerOptionsResponse"/>
   </message>
   <portType name="MsaWS">
     <operation name="getResult">
@@ -93,6 +93,13 @@
       <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getResultResponse" message="tns:getResultResponse"/>
       <fault message="tns:ResultNotAvailableException" name="ResultNotAvailableException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getResult/Fault/ResultNotAvailableException"/>
     </operation>
+    <operation name="align">
+      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignRequest" message="tns:align"/>
+      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignResponse" message="tns:alignResponse"/>
+      <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/UnsupportedRuntimeException"/>
+      <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/LimitExceededException"/>
+      <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/JobSubmissionException"/>
+    </operation>
     <operation name="presetAlign">
       <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlignRequest" message="tns:presetAlign"/>
       <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlignResponse" message="tns:presetAlignResponse"/>
@@ -109,21 +116,14 @@
       <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlign/Fault/JobSubmissionException"/>
       <fault message="tns:WrongParameterException" name="WrongParameterException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlign/Fault/WrongParameterException"/>
     </operation>
-    <operation name="align">
-      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignRequest" message="tns:align"/>
-      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignResponse" message="tns:alignResponse"/>
-      <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/UnsupportedRuntimeException"/>
-      <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/LimitExceededException"/>
-      <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/JobSubmissionException"/>
+    <operation name="cancelJob">
+      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/cancelJobRequest" message="tns:cancelJob"/>
+      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/cancelJobResponse" message="tns:cancelJobResponse"/>
     </operation>
     <operation name="pullExecStatistics">
       <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/pullExecStatisticsRequest" message="tns:pullExecStatistics"/>
       <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/pullExecStatisticsResponse" message="tns:pullExecStatisticsResponse"/>
     </operation>
-    <operation name="cancelJob">
-      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/cancelJobRequest" message="tns:cancelJob"/>
-      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/cancelJobResponse" message="tns:cancelJobResponse"/>
-    </operation>
     <operation name="getJobStatus">
       <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getJobStatusRequest" message="tns:getJobStatus"/>
       <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getJobStatusResponse" message="tns:getJobStatusResponse"/>
@@ -132,17 +132,17 @@
       <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitRequest" message="tns:getLimit"/>
       <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitResponse" message="tns:getLimitResponse"/>
     </operation>
-    <operation name="getRunnerOptions">
-      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getRunnerOptionsRequest" message="tns:getRunnerOptions"/>
-      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getRunnerOptionsResponse" message="tns:getRunnerOptionsResponse"/>
+    <operation name="getLimits">
+      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitsRequest" message="tns:getLimits"/>
+      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitsResponse" message="tns:getLimitsResponse"/>
     </operation>
     <operation name="getPresets">
       <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getPresetsRequest" message="tns:getPresets"/>
       <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getPresetsResponse" message="tns:getPresetsResponse"/>
     </operation>
-    <operation name="getLimits">
-      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitsRequest" message="tns:getLimits"/>
-      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitsResponse" message="tns:getLimitsResponse"/>
+    <operation name="getRunnerOptions">
+      <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getRunnerOptionsRequest" message="tns:getRunnerOptions"/>
+      <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getRunnerOptionsResponse" message="tns:getRunnerOptionsResponse"/>
     </operation>
   </portType>
   <binding name="ClustalWSPortBinding" type="tns:MsaWS">
@@ -159,7 +159,7 @@
         <soap:fault name="ResultNotAvailableException" use="literal"/>
       </fault>
     </operation>
-    <operation name="presetAlign">
+    <operation name="align">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>
@@ -176,11 +176,8 @@
       <fault name="JobSubmissionException">
         <soap:fault name="JobSubmissionException" use="literal"/>
       </fault>
-      <fault name="WrongParameterException">
-        <soap:fault name="WrongParameterException" use="literal"/>
-      </fault>
     </operation>
-    <operation name="customAlign">
+    <operation name="presetAlign">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>
@@ -201,7 +198,7 @@
         <soap:fault name="WrongParameterException" use="literal"/>
       </fault>
     </operation>
-    <operation name="align">
+    <operation name="customAlign">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>
@@ -218,8 +215,11 @@
       <fault name="JobSubmissionException">
         <soap:fault name="JobSubmissionException" use="literal"/>
       </fault>
+      <fault name="WrongParameterException">
+        <soap:fault name="WrongParameterException" use="literal"/>
+      </fault>
     </operation>
-    <operation name="pullExecStatistics">
+    <operation name="cancelJob">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>
@@ -228,7 +228,7 @@
         <soap:body use="literal"/>
       </output>
     </operation>
-    <operation name="cancelJob">
+    <operation name="pullExecStatistics">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>
@@ -255,7 +255,7 @@
         <soap:body use="literal"/>
       </output>
     </operation>
-    <operation name="getRunnerOptions">
+    <operation name="getLimits">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>
@@ -273,7 +273,7 @@
         <soap:body use="literal"/>
       </output>
     </operation>
-    <operation name="getLimits">
+    <operation name="getRunnerOptions">
       <soap:operation soapAction=""/>
       <input>
         <soap:body use="literal"/>