X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Farchive%2Fbinaries%2Fmac%2Fsrc%2Fmuscle%2Fglbalign352.cpp;fp=website%2Farchive%2Fbinaries%2Fmac%2Fsrc%2Fmuscle%2Fglbalign352.cpp;h=0000000000000000000000000000000000000000;hb=fb21789ba11ae9b9f6abed1b01d4542e54abfe34;hp=6305c7c1c2235217d2be7235bff2d4cd61af92bc;hpb=7d68cf3489c816b2ed7afb1925a6de2168eccf4a;p=jabaws.git

diff --git a/website/archive/binaries/mac/src/muscle/glbalign352.cpp b/website/archive/binaries/mac/src/muscle/glbalign352.cpp
deleted file mode 100644
index 6305c7c..0000000
--- a/website/archive/binaries/mac/src/muscle/glbalign352.cpp
+++ /dev/null
@@ -1,55 +0,0 @@
-#include "muscle.h"
-#include "pwpath.h"
-#include "timing.h"
-#include "textfile.h"
-#include "msa.h"
-#include "profile.h"
-
-#if	VER_3_52
-
-#if	TIMING
-TICKS g_ticksDP = 0;
-#endif
-
-SCORE GlobalAlign(const ProfPos *PA, unsigned uLengthA, const ProfPos *PB,
-  unsigned uLengthB, PWPath &Path)
-	{
-#if	TIMING
-	TICKS t1 = GetClockTicks();
-#endif
-	SCORE Score = 0;
-	if (g_bDiags)
-		Score = GlobalAlignDiags(PA, uLengthA, PB, uLengthB, Path);
-	else
-		Score = GlobalAlignNoDiags(PA, uLengthA, PB, uLengthB, Path);
-#if	TIMING
-	TICKS t2 = GetClockTicks();
-	g_ticksDP += (t2 - t1);
-#endif
-	return Score;
-	}
-
-SCORE GlobalAlignNoDiags(const ProfPos *PA, unsigned uLengthA, const ProfPos *PB,
-  unsigned uLengthB, PWPath &Path)
-	{
-	if (g_bDimer)
-		return GlobalAlignDimer(PA, uLengthA, PB, uLengthB, Path);
-
-	switch (g_PPScore)
-		{
-	case PPSCORE_LE:
-		return GlobalAlignLE(PA, uLengthA, PB, uLengthB, Path);
-
-	case PPSCORE_SP:
-	case PPSCORE_SV:
-		return GlobalAlignSP(PA, uLengthA, PB, uLengthB, Path);
-
-	case PPSCORE_SPN:
-		return GlobalAlignSPN(PA, uLengthA, PB, uLengthB, Path);
-		}
-
-	Quit("Invalid PP score (GlobalAlignNoDiags)");
-	return 0;
-	}
-
-#endif	// VER_3_52