X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Fdm_javadoc%2Fallclasses-frame.html;h=094c6c59c780c7a4c217ee6e7713466cb2318e3a;hb=6695d8f2418a044b900e9a23dfc3bd04e0f7c222;hp=c45a41ed1d0b1eb2e488503b8987f0372b6fea77;hpb=02ace2e4cf6d29a70be3dd799f84e3f14333cdbb;p=jabaws.git

diff --git a/website/dm_javadoc/allclasses-frame.html b/website/dm_javadoc/allclasses-frame.html
index c45a41e..094c6c5 100644
--- a/website/dm_javadoc/allclasses-frame.html
+++ b/website/dm_javadoc/allclasses-frame.html
@@ -2,12 +2,12 @@
 <!--NewPage-->
 <HTML>
 <HEAD>
-<!-- Generated by javadoc (build 1.6.0_21) on Wed Nov 24 12:17:19 GMT 2010 -->
+<!-- Generated by javadoc (build 1.6.0_21) on Tue Dec 21 18:32:59 GMT 2010 -->
 <TITLE>
 All Classes
 </TITLE>
 
-<META NAME="date" CONTENT="2010-11-24">
+<META NAME="date" CONTENT="2010-12-21">
 
 <LINK REL ="stylesheet" TYPE="text/css" HREF="stylesheet.css" TITLE="Style">
 
@@ -25,14 +25,28 @@ All Classes
 <BR>
 <A HREF="compbio/data/sequence/AlignmentMetadata.html" title="class in compbio.data.sequence" target="classFrame">AlignmentMetadata</A>
 <BR>
+<A HREF="compbio/data/sequence/AnnotatedSequence.html" title="class in compbio.data.sequence" target="classFrame">AnnotatedSequence</A>
+<BR>
+<A HREF="compbio/data/msa/Annotation.html" title="interface in compbio.data.msa" target="classFrame"><I>Annotation</I></A>
+<BR>
 <A HREF="compbio/metadata/Argument.html" title="interface in compbio.metadata" target="classFrame"><I>Argument</I></A>
 <BR>
 <A HREF="compbio/metadata/ChunkHolder.html" title="class in compbio.metadata" target="classFrame">ChunkHolder</A>
 <BR>
 <A HREF="compbio/data/sequence/ClustalAlignmentUtil.html" title="class in compbio.data.sequence" target="classFrame">ClustalAlignmentUtil</A>
 <BR>
+<A HREF="compbio/data/sequence/ConservationMethod.html" title="enum in compbio.data.sequence" target="classFrame">ConservationMethod</A>
+<BR>
+<A HREF="compbio/data/sequence/DisemblResultAnnot.html" title="enum in compbio.data.sequence" target="classFrame">DisemblResultAnnot</A>
+<BR>
 <A HREF="compbio/data/sequence/FastaSequence.html" title="class in compbio.data.sequence" target="classFrame">FastaSequence</A>
 <BR>
+<A HREF="compbio/ws/client/IOHelper.html" title="class in compbio.ws.client" target="classFrame">IOHelper</A>
+<BR>
+<A HREF="compbio/data/msa/JABAService.html" title="interface in compbio.data.msa" target="classFrame"><I>JABAService</I></A>
+<BR>
+<A HREF="compbio/data/msa/JManagement.html" title="interface in compbio.data.msa" target="classFrame"><I>JManagement</I></A>
+<BR>
 <A HREF="compbio/metadata/JobExecutionException.html" title="class in compbio.metadata" target="classFrame">JobExecutionException</A>
 <BR>
 <A HREF="compbio/metadata/JobStatus.html" title="enum in compbio.metadata" target="classFrame">JobStatus</A>
@@ -47,8 +61,14 @@ All Classes
 <BR>
 <A HREF="compbio/metadata/LimitsManager.html" title="class in compbio.metadata" target="classFrame">LimitsManager</A>
 <BR>
+<A HREF="compbio/data/msa/Metadata.html" title="interface in compbio.data.msa" target="classFrame"><I>Metadata</I></A>
+<BR>
+<A HREF="compbio/ws/client/MetadataHelper.html" title="class in compbio.ws.client" target="classFrame">MetadataHelper</A>
+<BR>
 <A HREF="compbio/data/msa/MsaWS.html" title="interface in compbio.data.msa" target="classFrame"><I>MsaWS</I></A>
 <BR>
+<A HREF="compbio/data/sequence/MultiAnnotatedSequence.html" title="class in compbio.data.sequence" target="classFrame">MultiAnnotatedSequence</A>
+<BR>
 <A HREF="compbio/metadata/Option.html" title="class in compbio.metadata" target="classFrame">Option</A>
 <BR>
 <A HREF="compbio/metadata/Parameter.html" title="class in compbio.metadata" target="classFrame">Parameter</A>
@@ -63,10 +83,14 @@ All Classes
 <BR>
 <A HREF="compbio/metadata/RunnerConfig.html" title="class in compbio.metadata" target="classFrame">RunnerConfig</A>
 <BR>
+<A HREF="compbio/data/sequence/Score.html" title="class in compbio.data.sequence" target="classFrame">Score</A>
+<BR>
 <A HREF="compbio/data/sequence/SequenceUtil.html" title="class in compbio.data.sequence" target="classFrame">SequenceUtil</A>
 <BR>
 <A HREF="compbio/ws/client/Services.html" title="enum in compbio.ws.client" target="classFrame">Services</A>
 <BR>
+<A HREF="compbio/data/sequence/SMERFSConstraints.html" title="enum in compbio.data.sequence" target="classFrame">SMERFSConstraints</A>
+<BR>
 <A HREF="compbio/data/sequence/UnknownFileFormatException.html" title="class in compbio.data.sequence" target="classFrame">UnknownFileFormatException</A>
 <BR>
 <A HREF="compbio/metadata/UnsupportedRuntimeException.html" title="class in compbio.metadata" target="classFrame">UnsupportedRuntimeException</A>
