X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Fdm_javadoc%2Findex-files%2Findex-15.html;h=d9cad20851c2492bde3e8f0d37d4ec9896f35777;hb=5f582fe1adafda5df440d1d1b3955b2bca7fbc88;hp=6347061632f5072fcec698e851af728678e5c9de;hpb=02ace2e4cf6d29a70be3dd799f84e3f14333cdbb;p=jabaws.git
diff --git a/website/dm_javadoc/index-files/index-15.html b/website/dm_javadoc/index-files/index-15.html
index 6347061..d9cad20 100644
--- a/website/dm_javadoc/index-files/index-15.html
+++ b/website/dm_javadoc/index-files/index-15.html
@@ -2,12 +2,12 @@
-
+
R-Index
-
+
@@ -82,6 +82,9 @@ function windowTitle()
R
+- readAAConResults(InputStream) -
+Static method in class compbio.data.sequence.SequenceUtil
+
- Read AACon result with no alignment files.
- readClustalFile(InputStream) -
Static method in class compbio.data.sequence.ClustalAlignmentUtil
- Read Clustal formatted alignment.
@@ -92,6 +95,12 @@ Static method in class compbio.data.sequence.SequenceUtil
- Reads fasta sequences from inStream into the list of FastaSequence
objects
+
- readJRonn(File) -
+Static method in class compbio.data.sequence.SequenceUtil
+
-
+
- readJRonn(InputStream) -
+Static method in class compbio.data.sequence.SequenceUtil
+
- Reader for JRonn horizontal file format
- removeArgument(String) -
Method in class compbio.metadata.RunnerConfig
- Removes the argument
Argument if found.