X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Fdm_javadoc%2Findex-files%2Findex-5.html;h=ff314b091b6430432a0dbca9270017b22ff1312d;hb=46419ca632a15de10fda41831d5a738a3313d662;hp=8cc9c72842cfe7b8c62e7b3f02ae800af2dd76fa;hpb=6582e82919b0d3697fe5e96f1be6a369f90a2d93;p=jabaws.git
diff --git a/website/dm_javadoc/index-files/index-5.html b/website/dm_javadoc/index-files/index-5.html
index 8cc9c72..ff314b0 100644
--- a/website/dm_javadoc/index-files/index-5.html
+++ b/website/dm_javadoc/index-files/index-5.html
@@ -2,12 +2,12 @@
-
+
F-Index
-
+
@@ -82,10 +82,26 @@ function windowTitle()
F
+- fastaAlignment -
+Static variable in class compbio.ws.client.WSTester
+
-
+
- fastaInput -
+Static variable in class compbio.ws.client.WSTester
+
- Sequences to be used as input for all WS
+
- FastaReader - Class in compbio.data.sequence
- Reads files with FASTA formatted sequences.
- FastaReader(String) -
+Constructor for class compbio.data.sequence.FastaReader
+
- Header data can contain non-ASCII symbols and read in UTF8
+
- FastaReader(InputStream) -
+Constructor for class compbio.data.sequence.FastaReader
+
- This class will not close the incoming stream! So the client should do
+ so.
- FastaSequence - Class in compbio.data.sequence
- A FASTA formatted sequence.
- FastaSequence(String, String) -
Constructor for class compbio.data.sequence.FastaSequence
- Upon construction the any whitespace characters are removed from the
sequence
+
- from -
+Variable in class compbio.data.sequence.Range
+
-