X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Fdm_javadoc%2Findex-files%2Findex-5.html;h=ff314b091b6430432a0dbca9270017b22ff1312d;hb=faac303bf9ad8c17b71a55d23b7a2c0a9e6e2efa;hp=0f6766904b3accf92c947bea6f44147b76c30bf6;hpb=535359a3d592ee41bda72e7356f0181f6cee9d07;p=jabaws.git
diff --git a/website/dm_javadoc/index-files/index-5.html b/website/dm_javadoc/index-files/index-5.html
index 0f67669..ff314b0 100644
--- a/website/dm_javadoc/index-files/index-5.html
+++ b/website/dm_javadoc/index-files/index-5.html
@@ -2,12 +2,12 @@
-
+
F-Index
-
+
@@ -82,10 +82,26 @@ function windowTitle()
F
+- fastaAlignment -
+Static variable in class compbio.ws.client.WSTester
+
-
+
- fastaInput -
+Static variable in class compbio.ws.client.WSTester
+
- Sequences to be used as input for all WS
+
- FastaReader - Class in compbio.data.sequence
- Reads files with FASTA formatted sequences.
- FastaReader(String) -
+Constructor for class compbio.data.sequence.FastaReader
+
- Header data can contain non-ASCII symbols and read in UTF8
+
- FastaReader(InputStream) -
+Constructor for class compbio.data.sequence.FastaReader
+
- This class will not close the incoming stream! So the client should do
+ so.
- FastaSequence - Class in compbio.data.sequence
- A FASTA formatted sequence.
- FastaSequence(String, String) -
Constructor for class compbio.data.sequence.FastaSequence
- Upon construction the any whitespace characters are removed from the
sequence
+
- from -
+Variable in class compbio.data.sequence.Range
+
-