X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Fdm_javadoc%2Findex-files%2Findex-8.html;h=bc39158c4628007718f0020fb5a2b5e785cf5f3e;hb=faac303bf9ad8c17b71a55d23b7a2c0a9e6e2efa;hp=9b6b3de3de8832c388dbcf20e4b9c3bbfbea1fea;hpb=cb02e8a08893701386c270a8bf9d0f08b9cbc4db;p=jabaws.git diff --git a/website/dm_javadoc/index-files/index-8.html b/website/dm_javadoc/index-files/index-8.html index 9b6b3de..bc39158 100644 --- a/website/dm_javadoc/index-files/index-8.html +++ b/website/dm_javadoc/index-files/index-8.html @@ -2,12 +2,12 @@ - + I-Index - + @@ -82,6 +82,12 @@ function windowTitle()

I

+
id - +Variable in class compbio.data.sequence.ScoreManager.ScoreHolder +
  +
IOHelper - Class in compbio.ws.client
 
IOHelper() - +Constructor for class compbio.ws.client.IOHelper +
 
isAmbiguosProtein(String) - Static method in class compbio.data.sequence.SequenceUtil
Check whether the sequence confirms to amboguous protein sequence @@ -91,7 +97,7 @@ Method in class compbio.metadata.isExceeded(List<FastaSequence>) - Method in class compbio.metadata.Limit
Checks if the number of sequences or their average length in the dataset - exceeds limits the values defined by this Limit + exceeds this limit.
isNonAmbNucleotideSequence(String) - Static method in class compbio.data.sequence.SequenceUtil
Ambiguous DNA chars : AGTCRYMKSWHBVDN // differs from protein in only one @@ -99,19 +105,34 @@ Static method in class compbio.data.sequence.isNucleotideSequence(FastaSequence) - Static method in class compbio.data.sequence.SequenceUtil
  +
IsOperating - Class in compbio.data.msa.jaxws
 
IsOperating() - +Constructor for class compbio.data.msa.jaxws.IsOperating +
  +
isOperating(Services) - +Method in interface compbio.data.msa.RegistryWS +
Check whether a particular web service is working on this server +
IsOperatingResponse - Class in compbio.data.msa.jaxws
 
IsOperatingResponse() - +Constructor for class compbio.data.msa.jaxws.IsOperatingResponse +
 
isProteinSequence(String) - Static method in class compbio.data.sequence.SequenceUtil
  -
isRequired - -Variable in class compbio.metadata.Option -
 
isRequired() - Method in class compbio.metadata.Option
Flag that indicated that this option must be specified in the command line for an executable to run +
isReturn() - +Method in class compbio.data.msa.jaxws.CancelJobResponse +
  +
isReturn() - +Method in class compbio.data.msa.jaxws.IsOperatingResponse +
 
isValidClustalFile(InputStream) - Static method in class compbio.data.sequence.ClustalAlignmentUtil
Please note this method closes the input stream provided as a parameter +
IUPRED_INFO - +Static variable in enum compbio.ws.client.Services +