X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Ffull_javadoc%2Fallclasses-frame.html;h=9ddd913886716d045f45647c00057af0c9fe2e73;hb=faac303bf9ad8c17b71a55d23b7a2c0a9e6e2efa;hp=16054f818ff94f153677f4865c0b39f14848ca0c;hpb=b413eee53fa3cc22a6bd4e03c9ac64bf26b7c834;p=jabaws.git diff --git a/website/full_javadoc/allclasses-frame.html b/website/full_javadoc/allclasses-frame.html index 16054f8..9ddd913 100644 --- a/website/full_javadoc/allclasses-frame.html +++ b/website/full_javadoc/allclasses-frame.html @@ -2,12 +2,12 @@ - + All Classes - + @@ -21,7 +21,13 @@ All Classes -
Align +AACon +
+AAConClient +
+AAConWS +
+Align
Alignment
@@ -29,6 +35,12 @@ All Classes
AlignResponse
+Analize +
+AnalizeResponse +
+AnnualStat +
Argument
AsyncExecutor @@ -39,6 +51,10 @@ All Classes
BlastAll
+BlastBlastComparator +
+BlastHmmerComparator +
BlastParameters
BlastParser @@ -47,20 +63,24 @@ All Classes
CancelJobResponse
+Category +
ChunkHolder
Cleaner
ClustalAlignmentUtil
+ClustalO +
+ClustalOWS +
ClustalW
ClustalWS
ClusterJobId
-ClusterNativeSpecExecutable -
ClusterSession
ClusterUtil @@ -73,13 +93,27 @@ All Classes
ConfiguredExecutable
+ConservationMethod +
CustomAlign
CustomAlignResponse
+CustomAnalize +
+CustomAnalizeResponse +
DirectoryManager
-Disembl +Disembl +
+DisemblWS +
+DisorderMethod +
+DisplayStat +
+DownloadRedirector
Environment
@@ -91,14 +125,34 @@ All Classes
ExecutableWrapper
+ExecutionStatCollector +
+FastaReader +
FastaSequence
FilePuller
+GAUtils +
+GenericMetadataService +
+GetAnnotation +
+GetAnnotationResponse +
GetJobStatus
GetJobStatusResponse
+GetLastTested +
+GetLastTestedOn +
+GetLastTestedOnResponse +
+GetLastTestedResponse +
GetLimit
GetLimitResponse @@ -111,10 +165,6 @@ All Classes
GetPresetsResponse
-GetProgress -
-GetProgressResponse -
GetResult
GetResultResponse @@ -123,16 +173,60 @@ All Classes
GetRunnerOptionsResponse
+GetServiceCategories +
+GetServiceCategoriesResponse +
+GetServiceDescription +
+GetServiceDescriptionResponse +
+GetSupportedServices +
+GetSupportedServicesResponse +
+GlobPlot +
+GlobPlotWS +
+Hit +
+Hit.EvalueComporator +
+Hit.NumberComporator +
+HttpCodeResponseServiceStatus +
+InputFilter +
+IOHelper +
+IsOperating +
+IsOperatingResponse +
+IUPred +
+IUPredWS +
+JABAService +
+JackHmmerHitParser +
+JManagement +
JnetAnnotation
Job
JobExecutionException
-JobExecutionExceptionBean +Joblist
JobRunner
+JobStat +
JobStatus
JobSubmissionException @@ -145,9 +239,11 @@ All Classes
JpredResult
-Jws2Client +Jronn +
+JronnWS
-Jws2Client.Services +Jws2Client
Limit
@@ -171,6 +267,10 @@ All Classes
Mcl
+Metadata +
+MetadataHelper +
MsaWS
Muscle @@ -199,6 +299,10 @@ All Classes
PresetAlignResponse
+PresetAnalize +
+PresetAnalizeResponse +
PresetManager
Probcons @@ -215,17 +319,17 @@ All Classes
PSIBlast
-PsiBlast -
PulledFileCache
PullExecStatistics
PullExecStatisticsResponse
-PullFile +Range
-PullFileResponse +RegistryWS +
+RegistryWS
ResultNotAvailableException
@@ -243,14 +347,48 @@ All Classes
Runners
+Score +
+ScoreManager +
+ScoreManager.ScoreHolder +
+SequenceAnnotation +
+SequenceAnnotationService +
SequenceUtil
+Services +
+ServiceStatus +
+ServicesUtil +
+ServiceTestResult +
+SetExecutableFlag +
+ShutdownEngines +
SimpleWSPublisher
SkeletalExecutable
+SMERFSConstraints +
+StatCollection +
+StatCollection.Stattype +
+StatDB +
+StatisticCollector +
StatisticManager
+StatProcessor +
StreamGobbler
SubmissionManager @@ -261,6 +399,16 @@ All Classes
TcoffeeWS
+TestAllServices +
+TestAllServicesResponse +
+TestService +
+TestServiceResponse +
+Totals +
UnknownFileFormatException
UnsupportedRuntimeException @@ -283,23 +431,19 @@ All Classes
WSUtil
-_DrmaaExample -
-_JobStatus -
_Jpred
_Key
+_MsaService +
_NativeSpecHelper
_Queue
-_QueueConstraints -
_SkeletalCommandBuilder
-_TrackingExecutor +_WSLogger