X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Findex.html;h=35cb0290c99e97f48bdf197dfdd415d57b3a1f90;hb=c97b1954611988b2b1d2e9aeec6e4b0696a0ab66;hp=8c73f54916b7129eba63427502e92e8976c79fd2;hpb=b0423691d9a44eae86799ad242c4fea58f9acd8d;p=jabaws.git diff --git a/website/index.html b/website/index.html index 8c73f54..35cb029 100644 --- a/website/index.html +++ b/website/index.html @@ -12,14 +12,15 @@ page "print.css" /> + +
@@ -32,14 +33,15 @@ page Manual Download Contact Us + Usage Statistics Barton Group
-

JABAWS

-

JABAWS:MSA provides five web services for multiple sequence alignment: Clustal W, JABAWS 2 +

JABAWS2.0:Disorder is free software which provides web services for prediction of protein disorder, multiple sequence alignment and amino acid conservation conveniently packaged to run on your local computer, server or cluster. Disorder prediction services are based on DisEMBL, IUPred, Ronn, GlobPlot, conservation is calculated by AACon, multiple sequence alignment services are the Clustal Omega, Clustal W, MAFFT, MUSCLE, TCOFFEE and PROBCONS conveniently packaged to run on your local computer, server or cluster. +"http://www.tcoffee.org/Projects_home_page/t_coffee_home_page.html"> TCOFFEE and PROBCONS. JABA Web Services can be accessed from the Jalview multiple sequence alignment editor and analysis workbench to allow multiple alignment calculations limited only by your own local computing resources.

@@ -61,7 +63,7 @@ page

For System Administrators

The Server: JABAWS Web Application aRchive (45M)

+"http://www.compbio.dundee.ac.uk/jabaws/archive/jaba.war">JABAWS Web Application aRchive (51M)

JABAWS requires a Servlet 2.4 compatible servlet container like Apache-Tomcat to run. Please check the quick start guide for installation instructions.

@@ -71,11 +73,11 @@ page

For Bioinformaticians/Developers

The Server: JABAWS Web Application aRchive (45M) +"http://www.compbio.dundee.ac.uk/jabaws/archive/jaba.war">JABAWS Web Application aRchive (51M)
The Client: - Command Line Client binary | source + Command Line Client binary | source @@ -100,13 +102,12 @@ title="http://www.compbio.dundee.ac.uk/jabaws/ClustalWS?" rel=

Publication

-

Peter V. Troshin, James B. Procter and Geoffrey J. Barton "JABAWS:MSA Distributed Web Services for Bioinformatics: Multiple Sequence Alignment" -- paper submitted.

+

Peter V. Troshin, James B. Procter and Geoffrey J. Barton - "Java Bioinformatics Analysis Web Services for Multiple Sequence Alignment - JABAWS:MSA" Bioinformatics 2011; doi: 10.1093/bioinformatics/btr304.

- +