X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=website%2Fman_dev.html;h=f18fb8ff29f9c1c4c060564784d394b262efd84c;hb=79c252c0ca4db2482cbbcd89841b409a5c413bdb;hp=2abadafe79a0141a9267a0e9cdc87aa63b79b90b;hpb=c219257fd9512af182cd65ab5bda8d3dc7ef12c6;p=jabaws.git

diff --git a/website/man_dev.html b/website/man_dev.html
index 2abadaf..f18fb8f 100644
--- a/website/man_dev.html
+++ b/website/man_dev.html
@@ -29,6 +29,7 @@
 	<div id="submenu">
 		<a href="man_about.html">About</a>
 		<a href="man_servervm.html" title="JABAWS Server as Virtual Appliance">Server VA</a>
+		<a href="man_awscloud.html" title="JABAWS Server in the Amazon EC2 Cloud">Server in the Cloud</a>
 		<a href="man_serverwar.html" title="JABAWS Server as Web Application aRchive">Server WAR</a>
 		<a href="man_configuration.html" >Server<br/>
 		Configuration</a>
@@ -39,8 +40,9 @@
 		<a href="man_server_dev.html" >JABAWS Development</a>
 	</div>
 <a href="download.html">Download</a> 
-<a href="contacts.html">Contact Us</a>
 <a href="PublicAnnualStat" title="JABAWS server usage statistics">Usage Statistics</a>
+ <a href="ServiceStatus" title="JABAWS webservices status. Click to test all web services. Please be patient while the services are being checked">Services Status</a>
+<a href="contacts.html">Contact Us</a>
 <a href="http://www.compbio.dundee.ac.uk" title="University of Dundee, The Barton Group" >Barton Group</a>
 
 </div>
@@ -152,13 +154,14 @@
 <ul>
   <li><a href="http://www.compbio.dundee.ac.uk/jabaws/IUPredWS?wsdl">IUPredWS</a> (http://www.compbio.dundee.ac.uk/jabaws/IUPredWS?wsdl) </li>
   <li><a href="http://www.compbio.dundee.ac.uk/jabaws/GlobPlotWS?wsdl">GlobPlotWS</a> (http://www.compbio.dundee.ac.uk/jabaws/GlobPlotWS?wsdl) </li>
-  <li><a href="http://www.compbio.dundee.ac.uk/jabaws/DisEMBLWS?wsdl">DisEMBLWS</a> (http://www.compbio.dundee.ac.uk/jabaws/DisEMBLWS?wsdl) </li>
+  <li><a href="http://www.compbio.dundee.ac.uk/jabaws/DisemblWS?wsdl">DisemblWS</a> (http://www.compbio.dundee.ac.uk/jabaws/DisemblWS?wsdl) </li>
   <li><a href="http://www.compbio.dundee.ac.uk/jabaws/JronnWS?wsdl">JronnWS</a> (http://www.compbio.dundee.ac.uk/jabaws/JronnWS?wsdl) </li>
   </ul>
 <p>Amino acid conservation service</p>
 <ul>
   <li><a href="http://www.compbio.dundee.ac.uk/jabaws/AAConWS?wsdl">AAConWS</a> (http://www.compbio.dundee.ac.uk/jabaws/AAConWS?wsdl) </li>
-</ul>
+  </ul>
+<p>Please replace <span class="hightlight">http://www.compbio.dundee.ac.uk/</span> with your JABAWS instance host name, and <span class="hightlight">jabaws</span> with your JABAWS context name to access your local version of JABAWS web services. For example <span class="hightlight">http://localhost:8080/jabaws</span> would be a valid URL for the default Apache-Tomcat installation and jabaws.war file deployment. </p>
 <h3><a name="defalign" id="defalign"></a>Aligning sequences </h3>
 <p>Given that <span class="hightlight">msaws</span> is web service proxy, created as described in &quot;Connecting to JABAWS&quot; section, the actual alignment can be obtained as follows: </p>
 <p class="code">1) List&lt;FastaSequence&gt; fastalist = SequenceUtil.readFasta(new FileInputStream(file));<br />
@@ -351,7 +354,7 @@ For a more detailed description of all available types and their functions pleas
 </div>
 
 <!-- content end-->
-<div id="copyright">Last update: 1 April 2011<br />
+<div id="copyright">Last update: 16 September 2011<br />
  Peter Troshin, Jim Procter and Geoff Barton, The Barton Group, University of
 Dundee, UK</div>
 </div>