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(parent: 48276ce) | patch
PROT-1 Prepare project for Maven build system
authorSasha Sherstnev <a.sherstnev@dundee.ac.uk>
Fri, 15 Nov 2013 11:31:27 +0000 (11:31 +0000)
committerSasha Sherstnev <a.sherstnev@dundee.ac.uk>
Fri, 15 Nov 2013 11:31:27 +0000 (11:31 +0000)
commit008be2cc63154bacbe1cbf5fa03ffbe49fdc09da
treed02c01cec73f2a3d8991a966141406a3dc637bf7tree | snapshot
parent48276ceb9996330efbe7b8f1ad6ddc78eaea69dfcommit | diff
PROT-1 Prepare project for Maven build system
99 files changed:
README.txt [new file with mode: 0644] blob
pom.xml [new file with mode: 0644] blob
src/main/java/compbio/cassandra/CassandraNativeConnector.java [new file with mode: 0644] blob
src/main/java/compbio/cassandra/CassandraNewTableWriter.java [new file with mode: 0644] blob
src/main/java/compbio/cassandra/CassandraReader.java [new file with mode: 0644] blob
src/main/java/compbio/cassandra/CassandraWriter.java [new file with mode: 0644] blob
src/main/java/compbio/cassandra/DataBase.java [new file with mode: 0644] blob
src/main/java/compbio/cassandra/FastaReader.java [new file with mode: 0644] blob
src/main/java/compbio/cassandra/FastaSequence.java [new file with mode: 0644] blob
src/main/java/compbio/cassandra/JpredParser.java [new file with mode: 0644] blob
src/main/java/compbio/cassandra/JpredParserHTTP.java [new file with mode: 0644] blob
src/main/java/compbio/cassandra/JpredParserLocalFile.java [new file with mode: 0644] blob
src/main/java/compbio/cassandra/Pair.java [new file with mode: 0644] blob
src/main/java/compbio/cassandra/StructureJobLog.java [new file with mode: 0644] blob
src/main/java/compbio/cassandra/StructureProteinPrediction.java [new file with mode: 0644] blob
src/main/java/compbio/cassandra/readers/CassandraReaderExecutionTime.java [new file with mode: 0644] blob
src/main/java/compbio/engine/Job.java [new file with mode: 0644] blob
src/main/java/compbio/engine/JpredJob.java [new file with mode: 0644] blob
src/main/java/compbio/engine/ProteoCachePropertyHelperManager.java [new file with mode: 0644] blob
src/main/java/compbio/engine/archive/Archive.java [new file with mode: 0644] blob
src/main/java/compbio/engine/archive/ArchiveManager.java [new file with mode: 0644] blob
src/main/java/compbio/engine/archive/ArchivedJob.java [new file with mode: 0644] blob
src/main/java/compbio/listeners/ContextListener.java [new file with mode: 0644] blob
src/main/java/compbio/listeners/DetailList.java [new file with mode: 0644] blob
src/main/java/compbio/listeners/ServletJobsByDate.java [new file with mode: 0644] blob
src/main/java/compbio/listeners/ServletLogInfo.java [new file with mode: 0644] blob
src/main/java/compbio/listeners/ServletSequenceProtein.java [new file with mode: 0644] blob
src/main/java/compbio/listeners/ServletTimeExecution.java [new file with mode: 0644] blob
src/main/java/compbio/statistic/CassandraRequester.java [new file with mode: 0755] blob
src/main/java/compbio/statistic/StatisticsProt.java [new file with mode: 0755] blob
src/main/resources/META-INF/MANIFEST.MF [new file with mode: 0644] blob
src/main/resources/doc/packages.odt [new file with mode: 0644] blob
src/main/resources/log4j.properties [new file with mode: 0644] blob
src/main/website/AllReports.jsp [new file with mode: 0644] blob
src/main/website/Index.jsp [new file with mode: 0644] blob
src/main/website/PrintResult.jsp [new file with mode: 0644] blob
src/main/website/QueryJobsByDate.jsp [new file with mode: 0644] blob
src/main/website/QueryLogInfo.jsp [new file with mode: 0644] blob
src/main/website/QuerySequenceProtein.jsp [new file with mode: 0644] blob
src/main/website/QueryTimeExecition.jsp [new file with mode: 0644] blob
src/main/website/ReportJobsByDate.jsp [new file with mode: 0644] blob
src/main/website/ReportLogInfo.jsp [new file with mode: 0644] blob
src/main/website/ReportSequenceProtein.jsp [new file with mode: 0644] blob
src/main/website/ReportTimeExecution.jsp [new file with mode: 0644] blob
src/main/website/StatisticsProtein.jsp [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/CassandraNativeConnector.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/CassandraNewTableWriter.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/CassandraReader.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/CassandraWriter.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/DataBase.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/FastaReader$1.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/FastaReader.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/FastaSequence.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/JpredParser.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/JpredParserHTTP.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/JpredParserLocalFile.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/Pair.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/StructureJobLog.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/StructureProteinPrediction.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/cassandra/readers/CassandraReaderExecutionTime.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/engine/Job.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/engine/JpredJob.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/engine/ProteoCachePropertyHelperManager.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/engine/archive/Archive.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/engine/archive/ArchiveManager.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/engine/archive/ArchivedJob.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/listeners/ContextListener$1.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/listeners/ContextListener$2.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/listeners/ContextListener$3.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/listeners/ContextListener.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/listeners/DetailList.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/listeners/ServletJobsByDate.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/listeners/ServletLogInfo.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/listeners/ServletSequenceProtein.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/listeners/ServletTimeExecution.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/statistic/CassandraRequester.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/compbio/statistic/StatisticsProt.class [new file with mode: 0644] blob
src/main/website/WEB-INF/classes/lib/testng-5.10-jdk15.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/cassandra-driver-core-2.0.0-beta3-SNAPSHOT-javadoc.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/cassandra-driver-core-2.0.0-beta3-SNAPSHOT-sources.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/cassandra-driver-core-2.0.0-beta3-SNAPSHOT.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/displaytag-1.2.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/guava-15.0.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/jabaws-core-2.1.0.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/jabaws-core-src-2.1.0.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/jackson-core-asl-1.9.13.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/jackson-mapper-asl-1.9.13.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/jstl-1.2.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/log4j-1.2.16.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/lz4-1.2.0.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/metrics-core-3.0.1.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/netty-3.6.6.Final.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/slf4j-api-1.7.5.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/slf4j-simple-1.7.5.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/lib/snappy-java-1.1.0.jar [new file with mode: 0644] blob
src/main/website/WEB-INF/web.xml [new file with mode: 0644] blob
src/main/website/conf/Engine.properties [new file with mode: 0644] blob
src/main/website/conf/GA.properties [new file with mode: 0644] blob
src/main/website/conf/Proteocache.properties [new file with mode: 0644] blob