Refactor:
authorpvtroshin <pvtroshin@e3abac25-378b-4346-85de-24260fe3988d>
Mon, 18 Apr 2011 14:59:49 +0000 (14:59 +0000)
committerpvtroshin <pvtroshin@e3abac25-378b-4346-85de-24260fe3988d>
Mon, 18 Apr 2011 14:59:49 +0000 (14:59 +0000)
commit021b24f125d8b1e8390e99b4a835469dabdd7be1
treefe29362cf0a860b3a806d5cbbc4e35459d2d3dcf
parentb0423691d9a44eae86799ad242c4fea58f9acd8d
Refactor:
relocate getLimit() method from Util client to Util engine as  SkeletalExecutable (part of the engine depends on it)

Update compile ant task to get rid of warnings.
However, ant still does not complile due to cast issue. TODO later
Updating version of utils and datamodel as it includes the utils

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3967 e3abac25-378b-4346-85de-24260fe3988d
20 files changed:
.classpath
TODO.txt
WEB-INF/lib/compbio-util-1.3.jar [deleted file]
WEB-INF/lib/compbio-util-1.4.jar [new file with mode: 0644]
build.xml
engine/compbio/engine/client/PathValidator.java
engine/compbio/engine/client/SkeletalExecutable.java
engine/compbio/engine/client/Util.java
runner/compbio/runner/Util.java
testsrc/compbio/metadata/AllTestSuit.java
webservices/compbio/ws/server/AAConWS.java
webservices/compbio/ws/server/ClustalWS.java
webservices/compbio/ws/server/DisemblWS.java
webservices/compbio/ws/server/GlobPlotWS.java
webservices/compbio/ws/server/JronnWS.java
webservices/compbio/ws/server/MafftWS.java
webservices/compbio/ws/server/MuscleWS.java
webservices/compbio/ws/server/ProbconsWS.java
webservices/compbio/ws/server/TcoffeeWS.java
website/archive/datamodel-1.1.jar [new file with mode: 0644]