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(parent: b222b98) | patch
JWS-112 Bumping version of ClustalO (src, binaries and windows) to version 1.2.4.
authorFábio Madeira <fmmarquesmadeira@dundee.ac.uk>
Mon, 10 Apr 2017 09:46:53 +0000 (10:46 +0100)
committerFábio Madeira <fmmarquesmadeira@dundee.ac.uk>
Tue, 11 Apr 2017 11:19:34 +0000 (12:19 +0100)
commit1eab6cadc31107fabe7ef060de1ae91eeb4a025b
treea9e7591e378cbcc3572ac86098ed5dc5db3dcdf6tree | snapshot
parentb222b987978b6b2d4b6fb1b4a3a2a0ea87a19c3dcommit | diff
JWS-112 Bumping version of ClustalO (src, binaries and windows) to version 1.2.4.
331 files changed:
binaries/src/clustalo/ChangeLog diff | blob | history
binaries/src/clustalo/Doxyfile diff | blob | history
binaries/src/clustalo/INSTALL diff | blob | history
binaries/src/clustalo/Makefile [new file with mode: 0644] blob
binaries/src/clustalo/README diff | blob | history
binaries/src/clustalo/_configs.sed [new file with mode: 0644] blob
binaries/src/clustalo/aclocal.m4 diff | blob | history
binaries/src/clustalo/clustalo.pc [new file with mode: 0644] blob
binaries/src/clustalo/config.log [new file with mode: 0644] blob
binaries/src/clustalo/config.status [new file with mode: 0644] blob
binaries/src/clustalo/configure diff | blob | history
binaries/src/clustalo/configure.ac diff | blob | history
binaries/src/clustalo/depcomp diff | blob | history
binaries/src/clustalo/install-sh diff | blob | history
binaries/src/clustalo/libtool [new file with mode: 0644] blob
binaries/src/clustalo/missing diff | blob | history
binaries/src/clustalo/src/.deps/clustal-omega.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/.deps/main.Po [new file with mode: 0644] blob
binaries/src/clustalo/src/.deps/mymain.Po [new file with mode: 0644] blob
binaries/src/clustalo/src/.libs/clustal-omega.o [new file with mode: 0644] blob
binaries/src/clustalo/src/.libs/libclustalo.a [new file with mode: 0644] blob
binaries/src/clustalo/src/.libs/libclustalo.la [new file with mode: 0644] blob
binaries/src/clustalo/src/.libs/libclustalo.lai [new file with mode: 0644] blob
binaries/src/clustalo/src/Makefile [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal-omega-config.h diff | blob | history
binaries/src/clustalo/src/clustal-omega.c diff | blob | history
binaries/src/clustalo/src/clustal-omega.h diff | blob | history
binaries/src/clustalo/src/clustal-omega.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal-omega.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/hhalign_wrapper.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/ktuple_pair.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/list.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/log.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/mbed.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/muscle_tree.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/muscle_upgma.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/pair_dist.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/progress.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/seq.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/symmatrix.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/tree.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/util.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.deps/weights.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/hhalign_wrapper.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/ktuple_pair.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/libclustal.a [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/libclustal.la [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/list.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/log.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/mbed.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/muscle_tree.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/muscle_upgma.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/pair_dist.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/progress.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/seq.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/symmatrix.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/tree.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/util.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/.libs/weights.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/Makefile [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/hhalign_wrapper.c diff | blob | history
binaries/src/clustalo/src/clustal/hhalign_wrapper.h diff | blob | history
binaries/src/clustalo/src/clustal/hhalign_wrapper.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/hhalign_wrapper.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/ktuple_pair.c diff | blob | history
binaries/src/clustalo/src/clustal/ktuple_pair.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/ktuple_pair.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/libclustal.la [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/list.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/list.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/log.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/log.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/mbed.c diff | blob | history
binaries/src/clustalo/src/clustal/mbed.h diff | blob | history
binaries/src/clustalo/src/clustal/mbed.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/mbed.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/muscle_tree.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/muscle_tree.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/muscle_upgma.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/muscle_upgma.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/pair_dist.c diff | blob | history
binaries/src/clustalo/src/clustal/pair_dist.h diff | blob | history
binaries/src/clustalo/src/clustal/pair_dist.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/pair_dist.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/progress.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/progress.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/seq.c diff | blob | history
binaries/src/clustalo/src/clustal/seq.h diff | blob | history
binaries/src/clustalo/src/clustal/seq.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/seq.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/symmatrix.c diff | blob | history
binaries/src/clustalo/src/clustal/symmatrix.h diff | blob | history
binaries/src/clustalo/src/clustal/symmatrix.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/symmatrix.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/tree.c diff | blob | history
binaries/src/clustalo/src/clustal/tree.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/tree.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/util.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/util.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/weights.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/clustal/weights.o [new file with mode: 0644] blob
binaries/src/clustalo/src/clustalo diff | blob | history
binaries/src/clustalo/src/clustalo-api-test.c diff | blob | history
binaries/src/clustalo/src/config.h [new file with mode: 0644] blob
binaries/src/clustalo/src/hhalign/.deps/hhalign.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/hhalign/.libs/hhalign.o [new file with mode: 0644] blob
binaries/src/clustalo/src/hhalign/.libs/libhhalign.a [new file with mode: 0644] blob
binaries/src/clustalo/src/hhalign/.libs/libhhalign.la [new file with mode: 0644] blob
binaries/src/clustalo/src/hhalign/Makefile [new file with mode: 0644] blob
binaries/src/clustalo/src/hhalign/general.h diff | blob | history
binaries/src/clustalo/src/hhalign/hash-C.h diff | blob | history
binaries/src/clustalo/src/hhalign/hhalign.cpp diff | blob | history
binaries/src/clustalo/src/hhalign/hhalign.h diff | blob | history
binaries/src/clustalo/src/hhalign/hhalign.lo [new file with mode: 0644] blob
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binaries/src/clustalo/src/hhalign/hhalignment-C.h diff | blob | history
binaries/src/clustalo/src/hhalign/hhfullalignment-C.h diff | blob | history
binaries/src/clustalo/src/hhalign/hhfullalignment.h diff | blob | history
binaries/src/clustalo/src/hhalign/hhfunc-C.h diff | blob | history
binaries/src/clustalo/src/hhalign/hhfunc.h diff | blob | history
binaries/src/clustalo/src/hhalign/hhhalfalignment-C.h diff | blob | history
binaries/src/clustalo/src/hhalign/hhhit-C.h diff | blob | history
binaries/src/clustalo/src/hhalign/hhhitlist-C.h diff | blob | history
binaries/src/clustalo/src/hhalign/hhhitlist.h diff | blob | history
binaries/src/clustalo/src/hhalign/hhhmm-C.h diff | blob | history
binaries/src/clustalo/src/hhalign/hhmatrices-C.h diff | blob | history
binaries/src/clustalo/src/hhalign/hhutil-C.h diff | blob | history
binaries/src/clustalo/src/hhalign/libhhalign.la [new file with mode: 0644] blob
binaries/src/clustalo/src/hhalign/util-C.h diff | blob | history
binaries/src/clustalo/src/kmpp/.deps/KMeans.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/kmpp/.deps/KmTree.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/kmpp/.deps/KmUtils.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/kmpp/.libs/KMeans.o [new file with mode: 0644] blob
binaries/src/clustalo/src/kmpp/.libs/KmTree.o [new file with mode: 0644] blob
binaries/src/clustalo/src/kmpp/.libs/KmUtils.o [new file with mode: 0644] blob
binaries/src/clustalo/src/kmpp/.libs/libkmpp.a [new file with mode: 0644] blob
binaries/src/clustalo/src/kmpp/.libs/libkmpp.la [new file with mode: 0644] blob
binaries/src/clustalo/src/kmpp/KMeans.lo [new file with mode: 0644] blob
binaries/src/clustalo/src/kmpp/KMeans.o [new file with mode: 0644] blob
binaries/src/clustalo/src/kmpp/KmTree.lo [new file with mode: 0644] blob
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binaries/src/clustalo/src/kmpp/KmUtils.lo [new file with mode: 0644] blob
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binaries/src/clustalo/src/kmpp/Makefile [new file with mode: 0644] blob
binaries/src/clustalo/src/kmpp/libkmpp.la [new file with mode: 0644] blob
binaries/src/clustalo/src/libclustalo.la [new file with mode: 0644] blob
binaries/src/clustalo/src/main.cpp diff | blob | history
binaries/src/clustalo/src/main.o [new file with mode: 0644] blob
binaries/src/clustalo/src/mymain.c diff | blob | history
binaries/src/clustalo/src/mymain.o [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/a2m.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/aligneval.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/alignio.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/clustal.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/cluster.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/dayhoff.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/eps.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/file.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/getopt.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/gki.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/gsi.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/gsi64.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/hsregex.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/iupac.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/msa.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/msf.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/phylip.Plo [new file with mode: 0644] blob
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binaries/src/clustalo/src/squid/.deps/rk.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/selex.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/seqencode.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/shuffle.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/sqerror.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/sqio.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/squidcore.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/sre_ctype.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/sre_math.Plo [new file with mode: 0644] blob
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binaries/src/clustalo/src/squid/.deps/sre_string.Plo [new file with mode: 0644] blob
binaries/src/clustalo/src/squid/.deps/ssi.Plo [new file with mode: 0644] blob
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binaries/src/clustalo/src/squid/.deps/stockholm.Plo [new file with mode: 0644] blob
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