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(parent: 3d0867b) | patch
Add JRonn runner, tester, methods to parse jronn output files.
authorpvtroshin <pvtroshin@e3abac25-378b-4346-85de-24260fe3988d>
Wed, 21 Jul 2010 16:27:56 +0000 (16:27 +0000)
committerpvtroshin <pvtroshin@e3abac25-378b-4346-85de-24260fe3988d>
Wed, 21 Jul 2010 16:27:56 +0000 (16:27 +0000)
commit48190e32e896a6f674284844a9ae75605aa40157
treeb1bb67f8adad6af035c8d66e45eb67ff33b6e525tree | snapshot
parent3d0867bf4ce1e80d1b147a29b3cbc982ee84167ccommit | diff
Add JRonn runner, tester,  methods to parse jronn output files.

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2638 e3abac25-378b-4346-85de-24260fe3988d
15 files changed:
TODO.txt diff | blob | history
binaries/jronn3.1.jar [new file with mode: 0644] blob
build.xml diff | blob | history
conf/Executable.properties diff | blob | history
conf/log4j.properties diff | blob | history
conf/settings/JronnLimits.xml [new file with mode: 0644] blob
conf/settings/JronnParameters.xml [new file with mode: 0644] blob
datamodel/compbio/data/sequence/AnnotatedSequence.java [new file with mode: 0644] blob
datamodel/compbio/data/sequence/SequenceUtil.java diff | blob | history
engine/compbio/engine/client/SkeletalExecutable.java diff | blob | history
runner/compbio/runner/Util.java diff | blob | history
runner/compbio/runner/disorder/Jronn.java [moved from runner/compbio/runner/disorder/RonnWrapper.java with 58% similarity] diff | blob | history
testsrc/compbio/data/sequence/SequenceUtilTester.java diff | blob | history
testsrc/compbio/runner/disorder/JronnTester.java [new file with mode: 0644] blob
testsrc/testdata/jronn.out [new file with mode: 0644] blob