Get rind of NativeClusterJob interface as pretty much every jobs best to use some...
authorpvtroshin <pvtroshin@e3abac25-378b-4346-85de-24260fe3988d>
Tue, 21 Jun 2011 12:06:02 +0000 (12:06 +0000)
committerpvtroshin <pvtroshin@e3abac25-378b-4346-85de-24260fe3988d>
Tue, 21 Jun 2011 12:06:02 +0000 (12:06 +0000)
commit87413bfedfbbb0dfb2a1110c37c9279bd1614ba5
tree81750cd92dcc7c966110e4244fb735735696f055
parent657405827b6133ed424fb874cfb3c1de755ef03f
Get rind of NativeClusterJob interface as pretty much every jobs best to use some cluster settings, and they are simply defined in the executable conf file and passed by the SkeletalExecutable.

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@4294 e3abac25-378b-4346-85de-24260fe3988d
conf/Executable.properties
engine/compbio/engine/client/ClusterNativeSpecExecutable.java [deleted file]
engine/compbio/engine/client/ConfExecutable.java
engine/compbio/engine/client/Executable.java
engine/compbio/engine/client/SkeletalExecutable.java
engine/compbio/engine/cluster/drmaa/JobRunner.java
runner/compbio/runner/_SkeletalCommandBuilder.java
runner/compbio/runner/_impl/NetNglyc.java
runner/compbio/runner/msa/Mafft.java
runner/compbio/runner/msa/Tcoffee.java