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author	Jim Procter <jprocter@dundee.ac.uk>
	Fri, 24 May 2024 14:25:07 +0000 (15:25 +0100)
committer	Jim Procter <jprocter@dundee.ac.uk>
	Fri, 24 May 2024 14:25:07 +0000 (15:25 +0100)
commit	72660f8e5c90ec6aba386714784cfd2bd137fbe5
tree	c85f2a1595f9d6ba83e01748ec59bf827d94380a	tree \| snapshot
parent	fe86192e63ce740b92eec50deb6305c19a58325f	commit \| diff

JAL-4257 JAL-4159 JAL-789 tidy up passing of score model to pairwise alignment directly/via pasimap and threading off the direct pairwise alignment calculation