new tol
authorcmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Thu, 20 Mar 2014 01:52:56 +0000 (01:52 +0000)
committercmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Thu, 20 Mar 2014 01:52:56 +0000 (01:52 +0000)
forester/data/tol_156.xml

index 13d68de..1219c70 100644 (file)
                                             </taxonomy>\r
                                             <clade>\r
                                               <taxonomy>\r
-                                                <id provider="uniprot">8353</id>\r
-                                                <scientific_name>Xenopus</scientific_name>\r
-                                                <rank>genus</rank>\r
+                                                <id provider="uniprot">8342</id>\r
+                                                <scientific_name>Anura</scientific_name>\r
+                                                <rank>order</rank>\r
                                               </taxonomy>\r
                                               <clade>\r
                                                 <taxonomy>\r
-                                                  <id provider="uniprot">8355</id>\r
-                                                  <code>XENLA</code>\r
-                                                  <scientific_name>Xenopus laevis</scientific_name>\r
-                                                  <authority>Daudin, 1802</authority>\r
-                                                  <common_name>African clawed frog</common_name>\r
-                                                  <synonym>Bufo laevis</synonym>\r
-                                                  <rank>species</rank>\r
-                                                  <uri>http://upload.wikimedia.org/wikipedia/commons/e/e3/Xenopus_laevis.jpg</uri>\r
+                                                  <id provider="uniprot">8353</id>\r
+                                                  <scientific_name>Xenopus</scientific_name>\r
+                                                  <rank>genus</rank>\r
                                                 </taxonomy>\r
+                                                <clade>\r
+                                                  <taxonomy>\r
+                                                    <id provider="uniprot">8355</id>\r
+                                                    <code>XENLA</code>\r
+                                                    <scientific_name>Xenopus laevis</scientific_name>\r
+                                                    <authority>Daudin, 1802</authority>\r
+                                                    <common_name>African clawed frog</common_name>\r
+                                                    <synonym>Bufo laevis</synonym>\r
+                                                    <rank>species</rank>\r
+                                                    <uri>http://upload.wikimedia.org/wikipedia/commons/e/e3/Xenopus_laevis.jpg</uri>\r
+                                                  </taxonomy>\r
+                                                </clade>\r
+                                                <clade>\r
+                                                  <taxonomy>\r
+                                                    <id provider="uniprot">8364</id>\r
+                                                    <code>XENTR</code>\r
+                                                    <scientific_name>Xenopus tropicalis</scientific_name>\r
+                                                    <common_name>Western clawed frog</common_name>\r
+                                                    <synonym>Silurana tropicalis</synonym>\r
+                                                    <rank>species</rank>\r
+                                                    <uri>http://genoweb.univ-rennes1.fr/OGP/xenopus%20tropicalis.jpg</uri>\r
+                                                  </taxonomy>\r
+                                                </clade>\r
                                               </clade>\r
                                               <clade>\r
                                                 <taxonomy>\r
-                                                  <id provider="uniprot">8364</id>\r
-                                                  <code>XENTR</code>\r
-                                                  <scientific_name>Xenopus tropicalis</scientific_name>\r
-                                                  <common_name>Western clawed frog</common_name>\r
-                                                  <synonym>Silurana tropicalis</synonym>\r
+                                                  <id provider="uniprot">8384</id>\r
+                                                  <code>BUFBU</code>\r
+                                                  <scientific_name>Bufo bufo</scientific_name>\r
+                                                  <common_name>European toad</common_name>\r
                                                   <rank>species</rank>\r
-                                                  <uri>http://genoweb.univ-rennes1.fr/OGP/xenopus%20tropicalis.jpg</uri>\r
+                                                  <uri>http://www.naturephoto-cz.com/photos/others/common-toad-22611.jpg</uri>\r
                                                 </taxonomy>\r
                                               </clade>\r
                                             </clade>\r
                                             <clade>\r
                                               <taxonomy>\r
-                                                <id provider="uniprot">54263</id>\r
-                                                <code>MESAL</code>\r
-                                                <scientific_name>Mesotriton alpestris</scientific_name>\r
-                                                <common_name>Alpine newt</common_name>\r
-                                                <synonym>Ichthyosaura alpestris</synonym>\r
-                                                <rank>species</rank>\r
-                                                <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0403/0436.jpeg</uri>\r
+                                                <id provider="uniprot">8293</id>\r
+                                                <scientific_name>Caudata</scientific_name>\r
+                                                <rank>order</rank>\r
                                               </taxonomy>\r
+                                              <clade>\r
+                                                <taxonomy>\r
+                                                  <id provider="uniprot">1331674</id>\r
+                                                  <scientific_name>Pleurodelinae</scientific_name>\r
+                                                  <rank>subfamily</rank>\r
+                                                </taxonomy>\r
+                                                <clade>\r
+                                                  <taxonomy>\r
+                                                    <id provider="uniprot">54263</id>\r
+                                                    <code>MESAL</code>\r
+                                                    <scientific_name>Mesotriton alpestris</scientific_name>\r
+                                                    <common_name>Alpine newt</common_name>\r
+                                                    <synonym>Ichthyosaura alpestris</synonym>\r
+                                                    <synonym>Mesotriton alpestris</synonym>\r
+                                                    <rank>species</rank>\r
+                                                    <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0403/0436.jpeg</uri>\r
+                                                  </taxonomy>\r
+                                                </clade>\r
+                                                <clade>\r
+                                                  <taxonomy>\r
+                                                    <id provider="uniprot">8316</id>\r
+                                                    <code>NOTVI</code>\r
+                                                    <scientific_name>Notophthalmus viridescens</scientific_name>\r
+                                                    <common_name>Eastern newt</common_name>\r
+                                                    <synonym>Triturus viridescens</synonym>\r
+                                                    <rank>species</rank>\r
+                                                    <uri>http://www.jeffpippen.com/herps/enewt120908-9654sandybottomz.jpg</uri>\r
+                                                  </taxonomy>\r
+                                                </clade>\r
+                                              </clade>\r
+                                              <clade>\r
+                                                <taxonomy>\r
+                                                  <id provider="uniprot">8341</id>\r
+                                                  <code>SIRIN</code>\r
+                                                  <scientific_name>Siren intermedia</scientific_name>\r
+                                                  <common_name>Lesser siren</common_name>\r
+                                                  <rank>species</rank>\r
+                                                  <uri>http://us.i1.yimg.com/us.yimg.com/i/ligans/animals/m/ar0181_1m.jpg</uri>\r
+                                                </taxonomy>\r
+                                              </clade>\r
                                             </clade>\r
                                           </clade>\r
                                           <clade>\r
                                               <id provider="uniprot">568273</id>\r
                                               <scientific_name>Machilis germanica</scientific_name>\r
                                               <rank>species</rank>\r
-                                              <uri>http://www.naturefg.com/images/c-animals/machilis.jpg</uri>\r
+                                              <uri>http://www.lucianabartolini.net/Immagini/Microcoryphia/Machilis-sp-02.jpg</uri>\r
                                             </taxonomy>\r
                                           </clade>\r
                                         </clade>\r
                                           <code>CAEEL</code>\r
                                           <scientific_name>Caenorhabditis elegans</scientific_name>\r
                                           <rank>species</rank>\r
-                                          <uri>http://homepages.ed.ac.uk/mbx/C_elegans/N2_picture.gif</uri>\r
+                                          <uri>http://www.easternct.edu/~adams/images/celegansmain.jpg</uri>\r
                                         </taxonomy>\r
                                       </clade>\r
                                     </clade>\r
                               <scientific_name>Acropora digitifera</scientific_name>\r
                               <common_name>Staghorn coral</common_name>\r
                               <rank>species</rank>\r
-                              <uri>http://www.botany.hawaii.edu/basch/uhnpscesu/htms/NPSAcorl/images/acropori/acrdigitif7.jpg</uri>\r
+                              <uri>http://mygenomix.files.wordpress.com/2011/07/sn-coral.jpg</uri>\r
                             </taxonomy>\r
                           </clade>\r
                           <clade>\r
                                                             <common_name>Inky cap fungus</common_name>\r
                                                             <synonym>Hormographiella aspergillata</synonym>\r
                                                             <rank>strain</rank>\r
-                                                            <uri>http://upload.wikimedia.org/wikipedia/commons/e/e9/Coprinopsis.cinerea.-.lindsey.jpg</uri>\r
+                                                            <uri>http://www.pnas.org/content/107/26/cover-expansion.medium.gif</uri>\r
                                                           </taxonomy>\r
                                                         </clade>\r
                                                       </clade>\r