Change version: 2.0.1 -> 2.5

diff --git a/website/contacts.html b/website/contacts.html
index 0f75f14..f1cdf1a 100644 (file)
--- a/website/contacts.html
+++ b/website/contacts.html
@@ -16,7 +16,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws3.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/develhome.html b/website/develhome.html
index 08e8697..e368430 100644 (file)
--- a/website/develhome.html
+++ b/website/develhome.html
@@ -15,7 +15,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws3.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/index.html b/website/index.html
index 48de3e7..c2ae888 100644 (file)
--- a/website/index.html
+++ b/website/index.html
@@ -19,7 +19,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws3.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5.0" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r
@@ -41,7 +41,7 @@
 \r
 <!-- panel end-->\r
 <div id="content">\r
-<h2 id="headtitle">JABAWS 3 (alpha)</h2>\r
+<h2 id="headtitle">JABAWS 2.5</h2>\r
 <p style="color:black; font-weight:normal; text-align:left;"><span style="border-bottom:dotted 1px #666" title="JAva Bioinformatics Analysis Web Services">JABAWS</span> \r
 is free software which provides <a href="http://en.wikipedia.org/wiki/Web_service">web services</a> conveniently packaged to run on your local computer, server, cluster or Amazon EC2 instance. Services for multiple sequence alignment \r
 include <a href="http://www.clustal.org/omega">Clustal Omega</a>, <a href="http://www.clustal.org/clustal2">Clustal W</a>, \r
@@ -52,7 +52,7 @@ prediction of protein disorder with <a href="http://dis.embl.de/">DisEMBL</a>, <
 and calculation of amino acid alignment conservation with <a href="http://www.compbio.dundee.ac.uk/aacon">AACon</a>.  \r
 </p><p> \r
 <span style="color:black; font-weight:normal; text-align:left;">\r
-JABA 2.0.1 Web Services installations can be accessed from the <strong><a href="http://www.jalview.org">Jalview</a> desktop application</strong> (version 2.8 onwards) and the <strong>JABAWS command-line client</strong>, and provide multiple alignment \r
+JABA 2.5 Web Services installations can be accessed from the <strong><a href="http://www.jalview.org">Jalview</a> desktop application</strong> (version 2.8 onwards) and the <strong>JABAWS command-line client</strong>, and provide multiple alignment \r
 and sequence analysis calculations limited only by your own computing resources.<br />\r
 </span></p>\r
 <div id="mainpagefeatures">\r
@@ -87,8 +87,8 @@ and sequence analysis calculations limited only by your own computing resources.
 <strong>The Server: </strong><a href="http://www.compbio.dundee.ac.uk/download/get?id=jabaws.war">JABAWS Web Application aRchive</a>  (55M)\r
   <br/>\r
   <strong>The Client: </strong>\r
-      Command Line Client <a href="http://www.compbio.dundee.ac.uk/download/get?id=min-jaba-client-2.0.1.jar">binary</a> | <a href=\r
-"http://www.compbio.dundee.ac.uk/download/get?id=jaba-client-src-2.0.1.jar">source</a> \r
+      Command Line Client <a href="http://www.compbio.dundee.ac.uk/download/get?id=min-jaba-client-2.5.jar">binary</a> | <a href=\r
+"http://www.compbio.dundee.ac.uk/download/get?id=jaba-client-src-2.5.jar">source</a> \r
 \r
 <p>\r
 You can either use the JABAWS Virtual Appliance or the JABAWS Web Application aRchive (WAR) from your own computer or a lab server. \r
@@ -103,8 +103,8 @@ Check out the <a href="manual_qs_client.html#qsc">quick start guide</a> for furt
 </div>\r
 \r
 <h3 style="margin:0;">Public JABAWS Server</h3>\r
-<p> You can access our public JABA Web Services with our <a href="http://www.compbio.dundee.ac.uk/download/get?id=min-jaba-client-2.0.1.jar">command line client</a>, \r
-    <a href="http://www.jalview.org/download.html">Jalview</a>, or with your own program. Jalview version 2.8 or later is fully compatible with JABAWS 2.0.1.\r
+<p> You can access our public JABA Web Services with our <a href="http://www.compbio.dundee.ac.uk/download/get?id=min-jaba-client-2.5.jar">command line client</a>, \r
+    <a href="http://www.jalview.org/download.html">Jalview</a>, or with your own program. Jalview version 2.8 or later is fully compatible with JABAWS 2.5.\r
     The latest versions of Jalview are configured to use public JABAWS server by default.</p>\r
 <ul>\r
   <li>The JABAWS public web services address is <strong>http://www.compbio.dundee.ac.uk/jabaws</strong> </li>\r
@@ -116,8 +116,8 @@ title="http://www.compbio.dundee.ac.uk/jabaws/ClustalWS?" rel=
    or if you are concerned about privacy or on an unreliable network connection, then you can \r
    <a href="http://www.compbio.dundee.ac.uk/download">download</a> and run the JABAWS Server on your own hardware.</p>\r
 <h3>Previous versions of JABAWS </h3>\r
-<p>We advise you to update to JABAWS 2.0.1 as this version is fully backward compatible with JABAWS v1.0 and v2.0 and \r
-  contains <a href="man_about.html#jaba2.0.1">some important bug fixes</a>. Please consult the <a href="man_about.html#jalviewsup">manual</a> for more information \r
+<p>We advise you to update to JABAWS 2.5 as this version is fully backward compatible with JABAWS v1.0 and v2.0 and \r
+  contains <a href="man_about.html#jaba2.5">some important bug fixes</a>. Please consult the <a href="man_about.html#jalviewsup">manual</a> for more information \r
   on compatibility between versions.</p><p>Should you require them, however, old versions of JABAWS are available here:</p><ul><li>\r
   <strong><a href="http://www.compbio.dundee.ac.uk/jabaws1">http://www.compbio.dundee.ac.uk/jabaws1</a></strong></li> \r
   <li><strong><a href="http://www.compbio.dundee.ac.uk/jabaws2">http://www.compbio.dundee.ac.uk/jabaws2</a></strong></li></ul> \r

diff --git a/website/jabaws_funding.html b/website/jabaws_funding.html
index ea3de86..586be70 100644 (file)
--- a/website/jabaws_funding.html
+++ b/website/jabaws_funding.html
@@ -16,7 +16,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws3.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/man_about.html b/website/man_about.html
index 03b97a9..f3fcd22 100644 (file)
--- a/website/man_about.html
+++ b/website/man_about.html
@@ -18,7 +18,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws3.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r
@@ -59,7 +59,7 @@
   <li><a href="#wisjaba">What is JABAWS?</a></li>\r
   <li><a href="#wjaba">JABAWS Benefits</a></li>\r
   <li><a href="#alprog">JABA Web Services Programs </a></li>\r
-  <li><a href="#jaba2.0.1">What is new in JABAWS 2?</a> </li>\r
+  <li><a href="#jaba2.5">What is new in JABAWS 2?</a> </li>\r
   <li><a href="#jabaclient">What is JABAWS Client</a>?</li>\r
   <li><a href="#jalviewsup">JABAWS versions compatibility and Jalview support </a></li>\r
   <li><a href="#cmdclient">Programmatic access to JABAWS</a></li>\r
@@ -106,7 +106,7 @@
 <p>Multiple Sequence Alignement </p>\r
 <ul>\r
   <li><a href="http://www.clustal.org/omega">Clustal Omega </a> (version 1.0.2)</li>\r
-  <li><a href="http://www.clustal.org/clustal2">ClustalW</a> (version 2.0.12)</li>\r
+  <li><a href="http://www.clustal.org/clustal2">ClustalW</a> (version 2.52)</li>\r
   <li><a href="http://align.bmr.kyushu-u.ac.jp/mafft/software/">Mafft</a> (version 6.857)</li>\r
   <li><a href="http://www.drive5.com/muscle">Muscle</a> (version 3.8.31) </li>\r
   <li><a href="http://www.tcoffee.org/Projects_home_page/t_coffee_home_page.html">Tcoffee</a> (version 8.99) </li>\r
@@ -126,8 +126,8 @@
 \r
 \r
 \r
-<h3><a name="jaba2.0.1"/></a>What is new in JABAWS 2.0.1? </h3>\r
-<strong>JABAWS Version 2.0.1 (Released 2nd Jul 2013)</strong><p>JABAWS 2.0.1 includes several bug fixes and minor updates for <a href="#jaba2">JABAWS Version 2</a>. These are listed below:</p>\r
+<h3><a name="jaba2.5"/></a>What is new in JABAWS 2.5? </h3>\r
+<strong>JABAWS Version 2.5 (Released 2nd Jul 2013)</strong><p>JABAWS 2.5 includes several bug fixes and minor updates for <a href="#jaba2">JABAWS Version 2</a>. These are listed below:</p>\r
 <ul>\r
   <li>Disembl returned swapped strings for HOTLOOPS and REM465</li>\r
   <li>Jronn failed to process jobs with more than 3 sequences</li>\r
@@ -171,8 +171,8 @@
 \r
 <h3><a name="jalviewsup"></a>JABAWS versions compatibility and Jalview support </h3>\r
 <p>\r
-  JABAWS version 2.0.1 is fully backward compatible with JABAWS v1.0 and v2.0. That means that all JABAWS v1.0 and \r
-  v2.0 clients should also be able to use JABAWS 2.0.1 services. To access the analysis web services introduced in\r
+  JABAWS version 2.5 is fully backward compatible with JABAWS v1.0 and v2.0. That means that all JABAWS v1.0 and \r
+  v2.0 clients should also be able to use JABAWS 2.5 services. To access the analysis web services introduced in\r
   JABAWS 2.0, however, clients that were designed for JABAWS v1.0 must be updated.\r
 </p>\r
 \r

diff --git a/website/man_awscloud.html b/website/man_awscloud.html
index 571d8ac..b1fe868 100644 (file)
--- a/website/man_awscloud.html
+++ b/website/man_awscloud.html
@@ -16,7 +16,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws3.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/man_awscloud_bs.html b/website/man_awscloud_bs.html
index 569cd21..2f044d7 100644 (file)
--- a/website/man_awscloud_bs.html
+++ b/website/man_awscloud_bs.html
@@ -17,7 +17,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws3.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/man_awscloud_ec2.html b/website/man_awscloud_ec2.html
index b528b7b..2deb2af 100644 (file)
--- a/website/man_awscloud_ec2.html
+++ b/website/man_awscloud_ec2.html
@@ -17,7 +17,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws3.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/man_client.html b/website/man_client.html
index 192c56b..03ffc13 100644 (file)
--- a/website/man_client.html
+++ b/website/man_client.html
@@ -16,7 +16,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws3.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/man_configuration.html b/website/man_configuration.html
index 7c27d73..18dbfd2 100644 (file)
--- a/website/man_configuration.html
+++ b/website/man_configuration.html
@@ -16,7 +16,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws3.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/man_dev.html b/website/man_dev.html
index 91b3b3c..42ca51f 100644 (file)
--- a/website/man_dev.html
+++ b/website/man_dev.html
@@ -16,7 +16,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws3.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/man_server_dev.html b/website/man_server_dev.html
index 8d453db..feb6e4e 100644 (file)
--- a/website/man_server_dev.html
+++ b/website/man_server_dev.html
@@ -15,7 +15,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws3.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/man_servervm.html b/website/man_servervm.html
index 228a1ae..3a0932a 100644 (file)
--- a/website/man_servervm.html
+++ b/website/man_servervm.html
@@ -16,7 +16,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws201-2.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/man_serverwar.html b/website/man_serverwar.html
index 0783417..ab356b7 100644 (file)
--- a/website/man_serverwar.html
+++ b/website/man_serverwar.html
@@ -16,7 +16,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws201-2.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r
@@ -184,7 +184,7 @@ modify the paths in <span class=
 "hightlight">executable.properties</span> as described above. Below are some suggestions on where you may be able to get the binaries for your system. </p>\r
 <ul>\r
   <li><a href="http://www.clustal.org/omega/#Download">Clustal Omega </a></li>\r
-  <li><a href="ftp://ftp.ebi.ac.uk/pub/software/clustalw2/2.0.12/">ClustalW</a></li>\r
+  <li><a href="ftp://ftp.ebi.ac.uk/pub/software/clustalw2/2.52/">ClustalW</a></li>\r
   <li><a href="http://mafft.cbrc.jp/alignment/software/">Mafft</a></li>\r
   <li><a href="http://www.drive5.com/muscle/download3.6.html">Muscle</a></li>\r
   <li><a href="http://www.tcoffee.org/Packages/Binaries/">Tcoffee</a></li>\r

diff --git a/website/man_stats.html b/website/man_stats.html
index f526be6..dc030ee 100644 (file)
--- a/website/man_stats.html
+++ b/website/man_stats.html
@@ -16,7 +16,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws201-2.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/manual_qs_amazon.html b/website/manual_qs_amazon.html
index c132212..b09606f 100644 (file)
--- a/website/manual_qs_amazon.html
+++ b/website/manual_qs_amazon.html
@@ -15,7 +15,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws201-2.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/manual_qs_client.html b/website/manual_qs_client.html
index 31dff99..c703e9d 100644 (file)
--- a/website/manual_qs_client.html
+++ b/website/manual_qs_client.html
@@ -15,7 +15,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws201-2.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/manual_qs_va.html b/website/manual_qs_va.html
index 91d2774..f367816 100644 (file)
--- a/website/manual_qs_va.html
+++ b/website/manual_qs_va.html
@@ -15,7 +15,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws201-2.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/manual_qs_war.html b/website/manual_qs_war.html
index 875a528..e2fc262 100644 (file)
--- a/website/manual_qs_war.html
+++ b/website/manual_qs_war.html
@@ -15,7 +15,7 @@
 <table>\r
   <tr>\r
     <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-    <td class="bg"><img src="images/jabaws201-2.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+    <td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
     <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
   </tr>\r
 </table>\r

diff --git a/website/quick_start.html b/website/quick_start.html
index 91fa02a..d52d7e3 100644 (file)
--- a/website/quick_start.html
+++ b/website/quick_start.html
@@ -14,7 +14,7 @@
 <div id="banner">\r
 <table>\r
 <tr><td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif"  alt="University of Dundee" width="158" height="90" class="logo"  title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-<td class="bg"><img src="images/jabaws201-2.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
+<td class="bg"><img src="images/jabaws25.png" width="263" height="60" alt="JABAWS-2.5" title="Java Bioinformatics Analysis Web Services version 2.5"/></td>\r
 <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
 </tr>\r
 </table>\r